Gene name: YMR051C
Reference locus (S288C): YMR051C
Gene biotype: protein_coding
Description: Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag
Top 10 interactors (score): YBL113C (0.482); RAD10 (0.45); PAU4 (0.45); YKL177W (0.45); PAU12 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CBS6412 | GCA_001738345.1 | Sake | Asia | MBVQ01000030.1:4-505:+ | gene-YMR051C_CBS6412 | rna-NM_001182548.1_CBS6412 | cds-NP_013766.1_CBS6412 | 33.4 | 37.9 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | JH711473.1:1-709:+ | gene-YMR051C_CENPK1137D | rna-NM_001182548.1_CENPK1137D | cds-NP_013766.1_CENPK1137D | 53.5 | 53.5 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:547792-549228:- | gene-YMR051C_NCIM3186 | rna-NM_001182548.1_NCIM3186 | cds-NP_013766.1_NCIM3186 | 91.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:377003-378325:- | gene-YMR051C_S288C | rna-NM_001182548.1_S288C | cds-NP_013766.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |