Gene name: YMR050C
Reference locus (S288C): YMR050C
Gene biotype: protein_coding
Description: Transposon Ty1-MR2 Gag-Pol polyprotein; Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes
Top 10 interactors (score): Unknown
Homologues (species, bitscore): CRK8 (Arabidopsis thaliana, 99.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | JH711473.1:1-709:+ | gene-YMR050C_CENPK1137D | rna-NM_001182547.2_CENPK1137D | cds-NP_013765.1_CENPK1137D | 13.4 | 13.4 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | MBVW01000146.1:1-719:+ | gene-YMR050C_MUCL30388 | rna-NM_001182547.2_MUCL30388 | cds-NP_013765.1_MUCL30388 | 13.5 | 13.6 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:117889-123157:+ | gene-YMR050C_NCIM3186 | rna-NM_001182547.2_NCIM3186 | cds-NP_013765.1_NCIM3186 | 80.7 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:373057-378325:- | gene-YMR050C_S288C | rna-NM_001182547.2_S288C | cds-NP_013765.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |