YMR007W (YMR007W)


Gene profile

Gene name: YMR007W
Reference locus (S288C): YMR007W
Gene biotype: protein_coding

Description: Uncharacterized protein YMR007W; Putative protein of unknown function; conserved among S. cerevisiae strains; YMR007W is not an essential gene

Top 10 interactors (score): YDL011C (0.918); YDL172C (0.918); YPR170C (0.918); YNL043C (0.918); YGL165C (0.914); YMR304C-A (0.85); YPR197C (0.818); CTS2 (0.571); CRZ1 (0.45); SPT8 (0.432)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:329576-329956:+ gene-YMR007W_AKU4011 rna-NM_001348864.1_AKU4011 cds-NP_001335804.1_AKU4011 99.7 100.0 Unannotated 1 1 0 False False False False True
BG1 GCA_001932575.1 Bioethanol South America MSHP01000201.1:212908-213288:- gene-YMR007W_BG1 rna-NM_001348864.1_BG1 cds-NP_001335804.1_BG1 99.7 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:269525-269905:+ gene-YMR007W_Bruggeman rna-NM_001348864.1_Bruggeman cds-NP_001335804.1_Bruggeman 99.4 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:272019-272399:+ gene-YMR007W_CAT1 rna-NM_001348864.1_CAT1 cds-NP_001335804.1_CAT1 99.7 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:262517-262897:+ gene-YMR007W_CBS1585 rna-NM_001348864.1_CBS1585 cds-NP_001335804.1_CBS1585 99.7 100.0 Unannotated 1 1 0 False False False False True
CBS436 GCA_001738355.1 Sake Asia CM005355.1:268061-268441:+ gene-YMR007W_CBS436 rna-NM_001348864.1_CBS436 cds-NP_001335804.1_CBS436 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:375921-376301:+ gene-YMR007W_CBS6412 rna-NM_001348864.1_CBS6412 cds-NP_001335804.1_CBS6412 99.7 100.0 Unannotated 1 1 0 False False False False True
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:261773-262153:+ gene-YMR007W_CBS6413 rna-NM_001348864.1_CBS6413 cds-NP_001335804.1_CBS6413 99.7 100.0 Unannotated 1 1 0 False False False False True
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:274690-275070:+ gene-YMR007W_CENPK1137D rna-NM_001348864.1_CENPK1137D cds-NP_001335804.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005483.1:262324-262704:+ gene-YMR007W_EthanolRed rna-NM_001348864.1_EthanolRed cds-NP_001335804.1_EthanolRed 99.7 100.0 Unannotated 1 1 0 False False False False True
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:265506-265886:+ gene-YMR007W_FaliES1 rna-NM_001348864.1_FaliES1 cds-NP_001335804.1_FaliES1 99.7 100.0 Unannotated 1 1 0 False False False False True
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000033.1:171040-171420:- gene-YMR007W_JAY291 rna-NM_001348864.1_JAY291 cds-NP_001335804.1_JAY291 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:267253-267633:+ gene-YMR007W_MUCL30387 rna-NM_001348864.1_MUCL30387 cds-NP_001335804.1_MUCL30387 99.4 100.0 Unannotated 1 1 0 False False False False True
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:271910-272290:+ gene-YMR007W_MUCL30388 rna-NM_001348864.1_MUCL30388 cds-NP_001335804.1_MUCL30388 99.4 100.0 Unannotated 1 1 0 False False False False True
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:262802-263182:+ gene-YMR007W_MUCL39482 rna-NM_001348864.1_MUCL39482 cds-NP_001335804.1_MUCL39482 99.7 100.0 Unannotated 1 1 0 False False False False True
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:268612-268992:+ gene-YMR007W_MUCL42920 rna-NM_001348864.1_MUCL42920 cds-NP_001335804.1_MUCL42920 99.4 100.0 Unannotated 1 1 0 False False False False True
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:279914-280294:+ gene-YMR007W_NCIM3186 rna-NM_001348864.1_NCIM3186 cds-NP_001335804.1_NCIM3186 98.9 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:262719-263099:+ gene-YMR007W_NCYC1407 rna-NM_001348864.1_NCYC1407 cds-NP_001335804.1_NCYC1407 99.7 100.0 Unannotated 1 1 0 False False False False True
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:268653-269033:+ gene-YMR007W_PE2H3 rna-NM_001348864.1_PE2H3 cds-NP_001335804.1_PE2H3 99.7 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:274748-275128:+ gene-YMR007W_PE2H4 rna-NM_001348864.1_PE2H4 cds-NP_001335804.1_PE2H4 99.7 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:279960-280340:+ gene-YMR007W_S288C rna-NM_001348864.1_S288C cds-NP_001335804.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000005.1:257927-258307:- gene-YMR007W_SA1 rna-NM_001348864.1_SA1 cds-NP_001335804.1_SA1 99.7 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:262575-262955:+ gene-YMR007W_ThermosaccDry rna-NM_001348864.1_ThermosaccDry cds-NP_001335804.1_ThermosaccDry 99.7 100.0 Unannotated 1 1 0 False False False False True
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:266540-266920:+ gene-YMR007W_VR1 rna-NM_001348864.1_VR1 cds-NP_001335804.1_VR1 99.7 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000027.1:241630-242010:+ gene-YMR007W_ZTW1 rna-NM_001348864.1_ZTW1 cds-NP_001335804.1_ZTW1 99.4 100.0 Unannotated 1 1 0 False False False False True

Additional files