YML131W (YML131W)


Gene profile

Gene name: YML131W
Reference locus (S288C): YML131W
Gene biotype: protein_coding

Description: Uncharacterized membrane protein YML131W; Protein of unknown function; similar to medium chain dehydrogenase/reductases; expression induced by stresses including osmotic shock, DNA damaging agents, and other chemicals; GFP-fusion protein localizes to the cytoplasm; protein abundance increases in response to DNA replication stress

Top 10 interactors (score): GRE2 (0.983); YLL056C (0.959); ENV9 (0.873); YNL134C (0.865); YLR460C (0.858); OYE3 (0.82); PRX1 (0.803); GTT2 (0.801); PBR1 (0.794); ZTA1 (0.794); YCR102C (0.783); ECM4 (0.773); SRX1 (0.768); CIS1 (0.76); SFA1 (0.741); ETR1 (0.737); UGA4 (0.724); GLR1 (0.71); YLR352W (0.707); RTA1 (0.695)

Homologues (species, bitscore): PTGR1 (Homo sapiens, 108.6); Ptgr1 (Mus musculus, 120.2); LOC566996 (Danio rerio, 118.6); ltb4dh (Xenopus tropicalis, 132.1); M106.3 (Caenorhabditis elegans, 60.5); AT1G65560 (Arabidopsis thaliana, 112.1)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:3919-5016:+ gene-YML131W_AKU4011 rna-NM_001182494.1_AKU4011 cds-NP_013575.1_AKU4011 99.5 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000201.1:472119-473216:- gene-YML131W_BG1 rna-NM_001182494.1_BG1 cds-NP_013575.1_BG1 99.9 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:10154-11251:+ gene-YML131W_Bruggeman rna-NM_001182494.1_Bruggeman cds-NP_013575.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:11194-12291:+ gene-YML131W_CAT1 rna-NM_001182494.1_CAT1 cds-NP_013575.1_CAT1 99.9 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:3919-5016:+ gene-YML131W_CBS1585 rna-NM_001182494.1_CBS1585 cds-NP_013575.1_CBS1585 99.5 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:9914-11011:+ gene-YML131W_CBS436 rna-NM_001182494.1_CBS436 cds-NP_013575.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:4681-5778:+ gene-YML131W_CBS6412 rna-NM_001182494.1_CBS6412 cds-NP_013575.1_CBS6412 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:3137-4234:+ gene-YML131W_CBS6413 rna-NM_001182494.1_CBS6413 cds-NP_013575.1_CBS6413 99.4 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:4717-5814:+ gene-YML131W_CENPK1137D rna-NM_001182494.1_CENPK1137D cds-NP_013575.1_CENPK1137D 99.0 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005483.1:4434-5531:+ gene-YML131W_EthanolRed rna-NM_001182494.1_EthanolRed cds-NP_013575.1_EthanolRed 98.9 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:4700-5797:+ gene-YML131W_FaliES1 rna-NM_001182494.1_FaliES1 cds-NP_013575.1_FaliES1 98.9 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000345.1:84440-85537:- gene-YML131W_JAY291 rna-NM_001182494.1_JAY291 cds-NP_013575.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:8211-9308:+ gene-YML131W_MUCL30387 rna-NM_001182494.1_MUCL30387 cds-NP_013575.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:11615-12712:+ gene-YML131W_MUCL30388 rna-NM_001182494.1_MUCL30388 cds-NP_013575.1_MUCL30388 99.8 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:3973-5070:+ gene-YML131W_MUCL39482 rna-NM_001182494.1_MUCL39482 cds-NP_013575.1_MUCL39482 99.5 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:7387-8484:+ gene-YML131W_MUCL42920 rna-NM_001182494.1_MUCL42920 cds-NP_013575.1_MUCL42920 99.7 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:10152-11249:+ gene-YML131W_NCIM3186 rna-NM_001182494.1_NCIM3186 cds-NP_013575.1_NCIM3186 99.2 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:4728-5825:+ gene-YML131W_NCYC1407 rna-NM_001182494.1_NCYC1407 cds-NP_013575.1_NCYC1407 99.5 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:10103-11200:+ gene-YML131W_PE2H3 rna-NM_001182494.1_PE2H3 cds-NP_013575.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:10041-11138:+ gene-YML131W_PE2H4 rna-NM_001182494.1_PE2H4 cds-NP_013575.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:10198-11295:+ gene-YML131W_S288C rna-NM_001182494.1_S288C cds-NP_013575.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000054.1:2028-3125:+ gene-YML131W_SA1 rna-NM_001182494.1_SA1 cds-NP_013575.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:4009-5106:+ gene-YML131W_ThermosaccDry rna-NM_001182494.1_ThermosaccDry cds-NP_013575.1_ThermosaccDry 98.9 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:8406-9503:+ gene-YML131W_VR1 rna-NM_001182494.1_VR1 cds-NP_013575.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000026.1:3197-4294:+ gene-YML131W_ZTW1 rna-NM_001182494.1_ZTW1 cds-NP_013575.1_ZTW1 98.8 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:15045-16142:+ gene-YML131W_Sparadoxus rna-NM_001182494.1_Sparadoxus cds-NP_013575.1_Sparadoxus 89.6 100.0 Verified 1 1 1 False True False False False

Additional files