Gene name: YML108W
Reference locus (S288C): YML108W
Gene biotype: protein_coding
Description: Uncharacterized protein YML108W; Protein of unknown function; structure defines a new subfamily of the split beta-alpha-beta sandwiches; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YML108W is not an essential gene; relative distribution to the nucleus increases upon DNA replication stress
Top 10 interactors (score): OXP1 (0.845); YLR326W (0.775); AAT2 (0.748); MKC7 (0.716); MRI1 (0.699); CEX1 (0.691); PEX32 (0.499); SKI8 (0.438)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:48515-48832:+ | gene-YML108W_AKU4011 | rna-NM_001182470.1_AKU4011 | cds-NP_013599.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:427291-427608:- | gene-YML108W_BG1 | rna-NM_001182470.1_BG1 | cds-NP_013599.1_BG1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:54775-55092:+ | gene-YML108W_Bruggeman | rna-NM_001182470.1_Bruggeman | cds-NP_013599.1_Bruggeman | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:56330-56647:+ | gene-YML108W_CAT1 | rna-NM_001182470.1_CAT1 | cds-NP_013599.1_CAT1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:48516-48833:+ | gene-YML108W_CBS1585 | rna-NM_001182470.1_CBS1585 | cds-NP_013599.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:54513-54830:+ | gene-YML108W_CBS436 | rna-NM_001182470.1_CBS436 | cds-NP_013599.1_CBS436 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:49279-49596:+ | gene-YML108W_CBS6412 | rna-NM_001182470.1_CBS6412 | cds-NP_013599.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:47743-48060:+ | gene-YML108W_CBS6413 | rna-NM_001182470.1_CBS6413 | cds-NP_013599.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:49391-49708:+ | gene-YML108W_CENPK1137D | rna-NM_001182470.1_CENPK1137D | cds-NP_013599.1_CENPK1137D | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:49025-49342:+ | gene-YML108W_EthanolRed | rna-NM_001182470.1_EthanolRed | cds-NP_013599.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:49301-49618:+ | gene-YML108W_FaliES1 | rna-NM_001182470.1_FaliES1 | cds-NP_013599.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000345.1:40562-40879:- | gene-YML108W_JAY291 | rna-NM_001182470.1_JAY291 | cds-NP_013599.1_JAY291 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:53225-53542:+ | gene-YML108W_MUCL30387 | rna-NM_001182470.1_MUCL30387 | cds-NP_013599.1_MUCL30387 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:56445-56762:+ | gene-YML108W_MUCL30388 | rna-NM_001182470.1_MUCL30388 | cds-NP_013599.1_MUCL30388 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:48531-48848:+ | gene-YML108W_MUCL39482 | rna-NM_001182470.1_MUCL39482 | cds-NP_013599.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:52689-53006:+ | gene-YML108W_MUCL42920 | rna-NM_001182470.1_MUCL42920 | cds-NP_013599.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:54747-55064:+ | gene-YML108W_NCIM3186 | rna-NM_001182470.1_NCIM3186 | cds-NP_013599.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:49325-49642:+ | gene-YML108W_NCYC1407 | rna-NM_001182470.1_NCYC1407 | cds-NP_013599.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:54764-55081:+ | gene-YML108W_PE2H3 | rna-NM_001182470.1_PE2H3 | cds-NP_013599.1_PE2H3 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:54702-55019:+ | gene-YML108W_PE2H4 | rna-NM_001182470.1_PE2H4 | cds-NP_013599.1_PE2H4 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:54793-55110:+ | gene-YML108W_S288C | rna-NM_001182470.1_S288C | cds-NP_013599.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000054.1:46779-47096:+ | gene-YML108W_SA1 | rna-NM_001182470.1_SA1 | cds-NP_013599.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:48599-48916:+ | gene-YML108W_ThermosaccDry | rna-NM_001182470.1_ThermosaccDry | cds-NP_013599.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:52984-53301:+ | gene-YML108W_VR1 | rna-NM_001182470.1_VR1 | cds-NP_013599.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:28085-28402:+ | gene-YML108W_ZTW1 | rna-NM_001182470.1_ZTW1 | cds-NP_013599.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:59537-59854:+ | gene-YML108W_Sparadoxus | rna-NM_001182470.1_Sparadoxus | cds-NP_013599.1_Sparadoxus | 90.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |