Gene name: YML096W
Reference locus (S288C): YML096W
Gene biotype: protein_coding
Description: Putative protein with similarity to asparagine synthetases; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YML096W is not an essential gene and partially overlaps the verified gene RAD10
Top 10 interactors (score): CCT3 (0.788); DUG3 (0.766); GUA1 (0.749); UBP9 (0.698); YGR130C (0.694); RFX1 (0.692); MST27 (0.673); HAP3 (0.667); MLF3 (0.651); SES1 (0.628); LSG1 (0.624); TMA108 (0.617); ADE4 (0.616); TAF13 (0.611); STO1 (0.606); GLN1 (0.597); DIM1 (0.575); ELP2 (0.572); GFA1 (0.571); FRT2 (0.568)
Homologues (species, bitscore): ASNSD1 (Homo sapiens, 157.5); Asnsd1 (Mus musculus, 165.2); asnsd1 (Danio rerio, 166.4); asnsd1 (Xenopus tropicalis, 170.2); CG17486 (Drosophila melanogaster, 140.2); M18.3 (Caenorhabditis elegans, 100.9); AT2G03667 (Arabidopsis thaliana, 191.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:73631-75208:+ | gene-YML096W_AKU4011 | rna-NM_001182456.1_AKU4011 | cds-NP_013613.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:400921-402498:- | gene-YML096W_BG1 | rna-NM_001182456.1_BG1 | cds-NP_013613.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:79885-81462:+ | gene-YML096W_Bruggeman | rna-NM_001182456.1_Bruggeman | cds-NP_013613.1_Bruggeman | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:81443-83020:+ | gene-YML096W_CAT1 | rna-NM_001182456.1_CAT1 | cds-NP_013613.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:73632-75209:+ | gene-YML096W_CBS1585 | rna-NM_001182456.1_CBS1585 | cds-NP_013613.1_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:79624-81201:+ | gene-YML096W_CBS436 | rna-NM_001182456.1_CBS436 | cds-NP_013613.1_CBS436 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:74396-75973:+ | gene-YML096W_CBS6412 | rna-NM_001182456.1_CBS6412 | cds-NP_013613.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:72860-74437:+ | gene-YML096W_CBS6413 | rna-NM_001182456.1_CBS6413 | cds-NP_013613.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:74499-76076:+ | gene-YML096W_CENPK1137D | rna-NM_001182456.1_CENPK1137D | cds-NP_013613.1_CENPK1137D | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:74136-75713:+ | gene-YML096W_EthanolRed | rna-NM_001182456.1_EthanolRed | cds-NP_013613.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:74413-75990:+ | gene-YML096W_FaliES1 | rna-NM_001182456.1_FaliES1 | cds-NP_013613.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000345.1:14192-15769:- | gene-YML096W_JAY291 | rna-NM_001182456.1_JAY291 | cds-NP_013613.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:78330-79907:+ | gene-YML096W_MUCL30387 | rna-NM_001182456.1_MUCL30387 | cds-NP_013613.1_MUCL30387 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:81554-83131:+ | gene-YML096W_MUCL30388 | rna-NM_001182456.1_MUCL30388 | cds-NP_013613.1_MUCL30388 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:73646-75223:+ | gene-YML096W_MUCL39482 | rna-NM_001182456.1_MUCL39482 | cds-NP_013613.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:78444-80021:+ | gene-YML096W_MUCL42920 | rna-NM_001182456.1_MUCL42920 | cds-NP_013613.1_MUCL42920 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:79863-81440:+ | gene-YML096W_NCIM3186 | rna-NM_001182456.1_NCIM3186 | cds-NP_013613.1_NCIM3186 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:74440-76017:+ | gene-YML096W_NCYC1407 | rna-NM_001182456.1_NCYC1407 | cds-NP_013613.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:79873-81450:+ | gene-YML096W_PE2H3 | rna-NM_001182456.1_PE2H3 | cds-NP_013613.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:79811-81388:+ | gene-YML096W_PE2H4 | rna-NM_001182456.1_PE2H4 | cds-NP_013613.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:79909-81486:+ | gene-YML096W_S288C | rna-NM_001182456.1_S288C | cds-NP_013613.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000054.1:71877-73454:+ | gene-YML096W_SA1 | rna-NM_001182456.1_SA1 | cds-NP_013613.1_SA1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:73709-75286:+ | gene-YML096W_ThermosaccDry | rna-NM_001182456.1_ThermosaccDry | cds-NP_013613.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:78092-79669:+ | gene-YML096W_VR1 | rna-NM_001182456.1_VR1 | cds-NP_013613.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:53210-54787:+ | gene-YML096W_ZTW1 | rna-NM_001182456.1_ZTW1 | cds-NP_013613.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:84490-86067:+ | gene-YML096W_Sparadoxus | rna-NM_001182456.1_Sparadoxus | cds-NP_013613.1_Sparadoxus | 87.9 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |