Gene name: YML083C
Reference locus (S288C): YML083C
Gene biotype: protein_coding
Description: Putative uncharacterized protein YML083C; Protein of unknown function; transcriptionally regulated by Upc2p via an upstream sterol response element; strong increase in transcript abundance during anaerobic growth compared to aerobic growth; cells deleted for YML083C do not exhibit growth defects in anerobic or anaerobic conditions
Top 10 interactors (score): PAU14 (0.78); PAU1 (0.78); YHL026C (0.772); YML082W (0.76); PAU8 (0.75); DAN1 (0.741); HES1 (0.723); PAU18 (0.67); PAU6 (0.67); AIM32 (0.67); YCR102C (0.659); PAU11 (0.653); TIR4 (0.629); PAU3 (0.614); UPC2 (0.613); AIM33 (0.61); PAU24 (0.591); IZH4 (0.575); CAB1 (0.573); DUS1 (0.573)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:93516-94772:- | gene-YML083C_AKU4011 | rna-NM_001182442.1_AKU4011 | cds-NP_013627.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:381359-382615:+ | gene-YML083C_BG1 | rna-NM_001182442.1_BG1 | cds-NP_013627.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:99684-100940:- | gene-YML083C_Bruggeman | rna-NM_001182442.1_Bruggeman | cds-NP_013627.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:101361-102617:- | gene-YML083C_CAT1 | rna-NM_001182442.1_CAT1 | cds-NP_013627.1_CAT1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:93523-94779:- | gene-YML083C_CBS1585 | rna-NM_001182442.1_CBS1585 | cds-NP_013627.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:99453-100709:- | gene-YML083C_CBS436 | rna-NM_001182442.1_CBS436 | cds-NP_013627.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:94233-95489:- | gene-YML083C_CBS6412 | rna-NM_001182442.1_CBS6412 | cds-NP_013627.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:92706-93962:- | gene-YML083C_CBS6413 | rna-NM_001182442.1_CBS6413 | cds-NP_013627.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:94501-95757:- | gene-YML083C_CENPK1137D | rna-NM_001182442.1_CENPK1137D | cds-NP_013627.1_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:93792-95048:- | gene-YML083C_EthanolRed | rna-NM_001182442.1_EthanolRed | cds-NP_013627.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:94301-95557:- | gene-YML083C_FaliES1 | rna-NM_001182442.1_FaliES1 | cds-NP_013627.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000366.1:61549-62805:+ | gene-YML083C_JAY291 | rna-NM_001182442.1_JAY291 | cds-NP_013627.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:98208-99464:- | gene-YML083C_MUCL30387 | rna-NM_001182442.1_MUCL30387 | cds-NP_013627.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:101354-102610:- | gene-YML083C_MUCL30388 | rna-NM_001182442.1_MUCL30388 | cds-NP_013627.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:93534-94790:- | gene-YML083C_MUCL39482 | rna-NM_001182442.1_MUCL39482 | cds-NP_013627.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:98264-99520:- | gene-YML083C_MUCL42920 | rna-NM_001182442.1_MUCL42920 | cds-NP_013627.1_MUCL42920 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:99748-101004:- | gene-YML083C_NCIM3186 | rna-NM_001182442.1_NCIM3186 | cds-NP_013627.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:94331-95587:- | gene-YML083C_NCYC1407 | rna-NM_001182442.1_NCYC1407 | cds-NP_013627.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:99692-100948:- | gene-YML083C_PE2H3 | rna-NM_001182442.1_PE2H3 | cds-NP_013627.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:99630-100886:- | gene-YML083C_PE2H4 | rna-NM_001182442.1_PE2H4 | cds-NP_013627.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:99794-101050:- | gene-YML083C_S288C | rna-NM_001182442.1_S288C | cds-NP_013627.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000041.1:83217-84473:+ | gene-YML083C_SA1 | rna-NM_001182442.1_SA1 | cds-NP_013627.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:93593-94849:- | gene-YML083C_ThermosaccDry | rna-NM_001182442.1_ThermosaccDry | cds-NP_013627.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:97981-99237:- | gene-YML083C_VR1 | rna-NM_001182442.1_VR1 | cds-NP_013627.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:73126-74382:- | gene-YML083C_ZTW1 | rna-NM_001182442.1_ZTW1 | cds-NP_013627.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:104294-105544:- | gene-YML083C_Sparadoxus | rna-NM_001182442.1_Sparadoxus | cds-NP_013627.1_Sparadoxus | 88.2 | 99.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |