Gene name: YML045W-A
Reference locus (S288C): YML045W-A
Gene biotype: protein_coding
Description: Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag
Top 10 interactors (score): Unknown
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | MBVO01000003.1:4-505:+ | gene-YML045W-A_AKU4011 | rna-NM_001184412.1_AKU4011 | cds-NP_058176.1_AKU4011 | 33.4 | 37.9 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | MBVS01000068.1:4-505:+ | gene-YML045W-A_CBS1585 | rna-NM_001184412.1_CBS1585 | cds-NP_058176.1_CBS1585 | 33.5 | 37.9 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:536057-537379:+ | gene-YML045W-A_NCIM3186 | rna-NM_001184412.1_NCIM3186 | cds-NP_058176.1_NCIM3186 | 64.3 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:155869-157191:- | gene-YML045W-A_PE2H3 | rna-NM_001184412.1_PE2H3 | cds-NP_058176.1_PE2H3 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:188650-189972:- | gene-YML045W-A_PE2H4 | rna-NM_001184412.1_PE2H4 | cds-NP_058176.1_PE2H4 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:184461-185783:+ | gene-YML045W-A_S288C | rna-NM_001184412.1_S288C | cds-NP_058176.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |