YML020W (YML020W)


Gene profile

Gene name: YML020W
Reference locus (S288C): YML020W
Gene biotype: protein_coding

Description: Uncharacterized protein YML020W; Putative protein of unknown function

Top 10 interactors (score): LIH1 (0.745); SSU1 (0.691); YSW1 (0.674); ABM1 (0.616); YBR184W (0.572); AIM2 (0.568); INA17 (0.563); TMT1 (0.56); QRI7 (0.553); GAL80 (0.497); PMP2 (0.487); AIM21 (0.483); URA10 (0.481)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:280743-282737:+ gene-YML020W_AKU4011 rna-NM_001182378.1_AKU4011 cds-NP_013692.1_AKU4011 99.6 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000201.1:260138-262132:- gene-YML020W_BG1 rna-NM_001182378.1_BG1 cds-NP_013692.1_BG1 99.4 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:220696-222690:+ gene-YML020W_Bruggeman rna-NM_001182378.1_Bruggeman cds-NP_013692.1_Bruggeman 99.6 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:223206-225200:+ gene-YML020W_CAT1 rna-NM_001182378.1_CAT1 cds-NP_013692.1_CAT1 99.4 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:213693-215687:+ gene-YML020W_CBS1585 rna-NM_001182378.1_CBS1585 cds-NP_013692.1_CBS1585 99.6 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:219226-221220:+ gene-YML020W_CBS436 rna-NM_001182378.1_CBS436 cds-NP_013692.1_CBS436 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:327430-329424:+ gene-YML020W_CBS6412 rna-NM_001182378.1_CBS6412 cds-NP_013692.1_CBS6412 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:212950-214944:+ gene-YML020W_CBS6413 rna-NM_001182378.1_CBS6413 cds-NP_013692.1_CBS6413 99.6 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:225671-227665:+ gene-YML020W_CENPK1137D rna-NM_001182378.1_CENPK1137D cds-NP_013692.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005483.1:213717-215711:+ gene-YML020W_EthanolRed rna-NM_001182378.1_EthanolRed cds-NP_013692.1_EthanolRed 99.6 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:216681-218675:+ gene-YML020W_FaliES1 rna-NM_001182378.1_FaliES1 cds-NP_013692.1_FaliES1 99.6 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000033.1:218242-220236:- gene-YML020W_JAY291 rna-NM_001182378.1_JAY291 cds-NP_013692.1_JAY291 99.4 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:218426-220420:+ gene-YML020W_MUCL30387 rna-NM_001182378.1_MUCL30387 cds-NP_013692.1_MUCL30387 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:223095-225089:+ gene-YML020W_MUCL30388 rna-NM_001182378.1_MUCL30388 cds-NP_013692.1_MUCL30388 99.5 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:213978-215972:+ gene-YML020W_MUCL39482 rna-NM_001182378.1_MUCL39482 cds-NP_013692.1_MUCL39482 99.6 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:219531-221525:+ gene-YML020W_MUCL42920 rna-NM_001182378.1_MUCL42920 cds-NP_013692.1_MUCL42920 99.4 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:231103-233097:+ gene-YML020W_NCIM3186 rna-NM_001182378.1_NCIM3186 cds-NP_013692.1_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:213919-215913:+ gene-YML020W_NCYC1407 rna-NM_001182378.1_NCYC1407 cds-NP_013692.1_NCYC1407 99.6 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:219817-221811:+ gene-YML020W_PE2H3 rna-NM_001182378.1_PE2H3 cds-NP_013692.1_PE2H3 99.4 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:225912-227906:+ gene-YML020W_PE2H4 rna-NM_001182378.1_PE2H4 cds-NP_013692.1_PE2H4 99.4 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:231149-233143:+ gene-YML020W_S288C rna-NM_001182378.1_S288C cds-NP_013692.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000088.1:5710-7704:- gene-YML020W_SA1 rna-NM_001182378.1_SA1 cds-NP_013692.1_SA1 99.4 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:213754-215748:+ gene-YML020W_ThermosaccDry rna-NM_001182378.1_ThermosaccDry cds-NP_013692.1_ThermosaccDry 99.6 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:217758-219752:+ gene-YML020W_VR1 rna-NM_001182378.1_VR1 cds-NP_013692.1_VR1 99.4 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000027.1:192808-194802:+ gene-YML020W_ZTW1 rna-NM_001182378.1_ZTW1 cds-NP_013692.1_ZTW1 99.6 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:224512-226503:+ gene-YML020W_Sparadoxus rna-NM_001182378.1_Sparadoxus cds-NP_013692.1_Sparadoxus 89.5 99.8 Verified 1 1 1 False True False False False

Additional files