Gene name: YML018C
Reference locus (S288C): YML018C
Gene biotype: protein_coding
Description: Uncharacterized vacuolar membrane protein YML018C; Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the membrane of the vacuole; physical interaction with Atg27p suggests a possible role in autophagy; YML018C is not an essential gene; relative distribution to the vacuolar membrane decreases upon DNA replication stress; YML018C has a paralog, THI74, that arose from the whole genome duplication; Belongs to the TPT transporter family
Top 10 interactors (score): YHR112C (0.865); AIM9 (0.78); FMP42 (0.75); VBA4 (0.718); RET3 (0.702); MXR1 (0.657); SEC26 (0.656); GAR1 (0.594); SAP4 (0.593); RET2 (0.578); HO (0.568); SNF8 (0.561); GOS1 (0.561); LEU5 (0.508); MTW1 (0.497); COT1 (0.492); PEP7 (0.482); LAT1 (0.464); MET10 (0.458); IDH1 (0.455)
Homologues (species, bitscore): SLC35F5 (Homo sapiens, 166.8); Slc35f5 (Mus musculus, 167.9); slc35f5 (Xenopus tropicalis, 95.9); CG8195 (Drosophila melanogaster, 146.4); B0041.5 (Caenorhabditis elegans, 105.1); AT4G32140 (Arabidopsis thaliana, 181.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:284363-285544:- | gene-YML018C_AKU4011 | rna-NM_001182376.1_AKU4011 | cds-NP_013694.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:257322-258503:+ | gene-YML018C_BG1 | rna-NM_001182376.1_BG1 | cds-NP_013694.1_BG1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:224325-225506:- | gene-YML018C_Bruggeman | rna-NM_001182376.1_Bruggeman | cds-NP_013694.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:226835-228016:- | gene-YML018C_CAT1 | rna-NM_001182376.1_CAT1 | cds-NP_013694.1_CAT1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:217313-218494:- | gene-YML018C_CBS1585 | rna-NM_001182376.1_CBS1585 | cds-NP_013694.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:222855-224036:- | gene-YML018C_CBS436 | rna-NM_001182376.1_CBS436 | cds-NP_013694.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:331050-332231:- | gene-YML018C_CBS6412 | rna-NM_001182376.1_CBS6412 | cds-NP_013694.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:216570-217751:- | gene-YML018C_CBS6413 | rna-NM_001182376.1_CBS6413 | cds-NP_013694.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:229292-230473:- | gene-YML018C_CENPK1137D | rna-NM_001182376.1_CENPK1137D | cds-NP_013694.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:217337-218518:- | gene-YML018C_EthanolRed | rna-NM_001182376.1_EthanolRed | cds-NP_013694.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:220301-221482:- | gene-YML018C_FaliES1 | rna-NM_001182376.1_FaliES1 | cds-NP_013694.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000033.1:215427-216608:+ | gene-YML018C_JAY291 | rna-NM_001182376.1_JAY291 | cds-NP_013694.1_JAY291 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:222055-223236:- | gene-YML018C_MUCL30387 | rna-NM_001182376.1_MUCL30387 | cds-NP_013694.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:226724-227905:- | gene-YML018C_MUCL30388 | rna-NM_001182376.1_MUCL30388 | cds-NP_013694.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:217598-218779:- | gene-YML018C_MUCL39482 | rna-NM_001182376.1_MUCL39482 | cds-NP_013694.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:223162-224343:- | gene-YML018C_MUCL42920 | rna-NM_001182376.1_MUCL42920 | cds-NP_013694.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:234725-235906:- | gene-YML018C_NCIM3186 | rna-NM_001182376.1_NCIM3186 | cds-NP_013694.1_NCIM3186 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:217539-218720:- | gene-YML018C_NCYC1407 | rna-NM_001182376.1_NCYC1407 | cds-NP_013694.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:223446-224627:- | gene-YML018C_PE2H3 | rna-NM_001182376.1_PE2H3 | cds-NP_013694.1_PE2H3 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:229541-230722:- | gene-YML018C_PE2H4 | rna-NM_001182376.1_PE2H4 | cds-NP_013694.1_PE2H4 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:234771-235952:- | gene-YML018C_S288C | rna-NM_001182376.1_S288C | cds-NP_013694.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000088.1:2894-4075:+ | gene-YML018C_SA1 | rna-NM_001182376.1_SA1 | cds-NP_013694.1_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:217374-218555:- | gene-YML018C_ThermosaccDry | rna-NM_001182376.1_ThermosaccDry | cds-NP_013694.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:221387-222568:- | gene-YML018C_VR1 | rna-NM_001182376.1_VR1 | cds-NP_013694.1_VR1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:196428-197609:- | gene-YML018C_ZTW1 | rna-NM_001182376.1_ZTW1 | cds-NP_013694.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:228126-229307:- | gene-YML018C_Sparadoxus | rna-NM_001182376.1_Sparadoxus | cds-NP_013694.1_Sparadoxus | 90.5 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |