Gene name: YML002W
Reference locus (S288C): YML002W
Gene biotype: protein_coding
Description: UPF0507 protein YML002W; Putative protein of unknown function; expression induced by heat and by calcium shortage; Belongs to the UPF0507 family
Top 10 interactors (score): YML003W (0.98); GIS4 (0.821); MUK1 (0.748); TRM12 (0.748); GLO1 (0.698); VPS9 (0.65); YPT7 (0.524); ATP3 (0.463); RIE1 (0.404); RPS13 (0.404)
Homologues (species, bitscore): AT3G01750 (Arabidopsis thaliana, 55.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:314115-316328:+ | gene-YML002W_AKU4011 | rna-NM_001182357.1_AKU4011 | cds-NP_013712.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:226495-228708:- | gene-YML002W_BG1 | rna-NM_001182357.1_BG1 | cds-NP_013712.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:254085-256298:+ | gene-YML002W_Bruggeman | rna-NM_001182357.1_Bruggeman | cds-NP_013712.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:256598-258811:+ | gene-YML002W_CAT1 | rna-NM_001182357.1_CAT1 | cds-NP_013712.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:247094-249307:+ | gene-YML002W_CBS1585 | rna-NM_001182357.1_CBS1585 | cds-NP_013712.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:252626-254839:+ | gene-YML002W_CBS436 | rna-NM_001182357.1_CBS436 | cds-NP_013712.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:360863-363012:+ | gene-YML002W_CBS6412 | rna-NM_001182357.1_CBS6412 | cds-NP_013712.1_CBS6412 | 90.7 | 95.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:246349-248562:+ | gene-YML002W_CBS6413 | rna-NM_001182357.1_CBS6413 | cds-NP_013712.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:259272-261485:+ | gene-YML002W_CENPK1137D | rna-NM_001182357.1_CENPK1137D | cds-NP_013712.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:247129-249342:+ | gene-YML002W_EthanolRed | rna-NM_001182357.1_EthanolRed | cds-NP_013712.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:250094-252307:+ | gene-YML002W_FaliES1 | rna-NM_001182357.1_FaliES1 | cds-NP_013712.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000033.1:184628-186841:- | gene-YML002W_JAY291 | rna-NM_001182357.1_JAY291 | cds-NP_013712.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:251813-254026:+ | gene-YML002W_MUCL30387 | rna-NM_001182357.1_MUCL30387 | cds-NP_013712.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:256479-258692:+ | gene-YML002W_MUCL30388 | rna-NM_001182357.1_MUCL30388 | cds-NP_013712.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:247374-249587:+ | gene-YML002W_MUCL39482 | rna-NM_001182357.1_MUCL39482 | cds-NP_013712.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:252929-255142:+ | gene-YML002W_MUCL42920 | rna-NM_001182357.1_MUCL42920 | cds-NP_013712.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:264495-266708:+ | gene-YML002W_NCIM3186 | rna-NM_001182357.1_NCIM3186 | cds-NP_013712.1_NCIM3186 | 87.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:247309-249522:+ | gene-YML002W_NCYC1407 | rna-NM_001182357.1_NCYC1407 | cds-NP_013712.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:253232-255445:+ | gene-YML002W_PE2H3 | rna-NM_001182357.1_PE2H3 | cds-NP_013712.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:259327-261540:+ | gene-YML002W_PE2H4 | rna-NM_001182357.1_PE2H4 | cds-NP_013712.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:264541-266754:+ | gene-YML002W_S288C | rna-NM_001182357.1_S288C | cds-NP_013712.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:271515-273728:- | gene-YML002W_SA1 | rna-NM_001182357.1_SA1 | cds-NP_013712.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:247157-249370:+ | gene-YML002W_ThermosaccDry | rna-NM_001182357.1_ThermosaccDry | cds-NP_013712.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:251119-253332:+ | gene-YML002W_VR1 | rna-NM_001182357.1_VR1 | cds-NP_013712.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:226200-228413:+ | gene-YML002W_ZTW1 | rna-NM_001182357.1_ZTW1 | cds-NP_013712.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:258605-260818:+ | gene-YML002W_Sparadoxus | rna-NM_001182357.1_Sparadoxus | cds-NP_013712.1_Sparadoxus | 89.3 | 99.9 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |