Gene name: YMC2
Reference locus (S288C): YBR104W
Gene biotype: protein_coding
Description: Carrier protein YMC2, mitochondrial; Putative mitochondrial inner membrane transporter; proposed role in oleate metabolism and glutamate biosynthesis; member of the mitochondrial carrier (MCF) family; YMC2 has a paralog, YMC1, that arose from the whole genome duplication
Top 10 interactors (score): ANT1 (0.753); YGR035C (0.712); YOR338W (0.692); CYT1 (0.689); ARG5,6 (0.681); YHM2 (0.649); HIS1 (0.618); YMC1 (0.617); MPC3 (0.614); MTM1 (0.6); COX6 (0.57); PDR12 (0.562); COX13 (0.539); ODC2 (0.482); AAC1 (0.475); QCR2 (0.472); DAK2 (0.451); PDR18 (0.45); QCR7 (0.448); MPC2 (0.435)
Homologues (species, bitscore): SLC25A29 (Homo sapiens, 163.7); Slc25a29 (Mus musculus, 153.3); slc25a29 (Danio rerio, 147.9); slc25a20.2 (Xenopus tropicalis, 137.1); colt (Drosophila melanogaster, 146.0); C54G10.4 (Caenorhabditis elegans, 142.5); BOU (Arabidopsis thaliana, 171.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:432029-433018:+ | gene-YBR104W_AKU4011 | rna-NM_001178452.3_AKU4011 | cds-NP_009662.3_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:423071-424060:+ | gene-YBR104W_BG1 | rna-NM_001178452.3_BG1 | cds-NP_009662.3_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:433807-434796:+ | gene-YBR104W_Bruggeman | rna-NM_001178452.3_Bruggeman | cds-NP_009662.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:436578-437567:+ | gene-YBR104W_CAT1 | rna-NM_001178452.3_CAT1 | cds-NP_009662.3_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:424314-425303:+ | gene-YBR104W_CBS1585 | rna-NM_001178452.3_CBS1585 | cds-NP_009662.3_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:432436-433425:+ | gene-YBR104W_CBS436 | rna-NM_001178452.3_CBS436 | cds-NP_009662.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:522542-523531:+ | gene-YBR104W_CBS6412 | rna-NM_001178452.3_CBS6412 | cds-NP_009662.3_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:429453-430442:+ | gene-YBR104W_CBS6413 | rna-NM_001178452.3_CBS6413 | cds-NP_009662.3_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:441567-442556:+ | gene-YBR104W_CENPK1137D | rna-NM_001178452.3_CENPK1137D | cds-NP_009662.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:558824-559813:+ | gene-YBR104W_EthanolRed | rna-NM_001178452.3_EthanolRed | cds-NP_009662.3_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:448107-449096:+ | gene-YBR104W_FaliES1 | rna-NM_001178452.3_FaliES1 | cds-NP_009662.3_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000312.1:19011-20000:+ | gene-YBR104W_JAY291 | rna-NM_001178452.3_JAY291 | cds-NP_009662.3_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:435842-436831:+ | gene-YBR104W_MUCL30387 | rna-NM_001178452.3_MUCL30387 | cds-NP_009662.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:434841-435830:+ | gene-YBR104W_MUCL30388 | rna-NM_001178452.3_MUCL30388 | cds-NP_009662.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:422457-423446:+ | gene-YBR104W_MUCL39482 | rna-NM_001178452.3_MUCL39482 | cds-NP_009662.3_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:431521-432510:+ | gene-YBR104W_MUCL42920 | rna-NM_001178452.3_MUCL42920 | cds-NP_009662.3_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:449464-450453:+ | gene-YBR104W_NCIM3186 | rna-NM_001178452.3_NCIM3186 | cds-NP_009662.3_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:425236-426225:+ | gene-YBR104W_NCYC1407 | rna-NM_001178452.3_NCYC1407 | cds-NP_009662.3_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:437856-438845:+ | gene-YBR104W_PE2H3 | rna-NM_001178452.3_PE2H3 | cds-NP_009662.3_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:435532-436521:+ | gene-YBR104W_PE2H4 | rna-NM_001178452.3_PE2H4 | cds-NP_009662.3_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:449667-450656:+ | gene-YBR104W_S288C | rna-NM_001178452.3_S288C | cds-NP_009662.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000017.1:27054-28043:- | gene-YBR104W_SA1 | rna-NM_001178452.3_SA1 | cds-NP_009662.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:447114-448103:+ | gene-YBR104W_ThermosaccDry | rna-NM_001178452.3_ThermosaccDry | cds-NP_009662.3_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:429117-430106:+ | gene-YBR104W_VR1 | rna-NM_001178452.3_VR1 | cds-NP_009662.3_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:422775-423764:+ | gene-YBR104W_ZTW1 | rna-NM_001178452.3_ZTW1 | cds-NP_009662.3_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:459699-460688:+ | gene-YBR104W_Sparadoxus | rna-NM_001178452.3_Sparadoxus | cds-NP_009662.3_Sparadoxus | 92.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |