Gene name: YMC1
Reference locus (S288C): YPR058W
Gene biotype: protein_coding
Description: Carrier protein YMC1, mitochondrial; Secondary mitochondrial inner membrane glycine transporter; required with HEM25 for the transport of glycine into mitochondria for the initiation of heme biosynthesis; proposed role in oleate metabolism and glutamate biosynthesis; member of the mitochondrial carrier (MCF) family; localizes to the vacuole in response to H2O2; YMC1 has a paralog, YMC2, that arose from the whole genome duplication
Top 10 interactors (score): MRPL11 (0.714); HEM25 (0.701); ARG5,6 (0.697); CYT1 (0.668); YHM2 (0.644); MDL2 (0.634); YMC2 (0.617); MPC3 (0.615); ORT1 (0.609); COX6 (0.587); SWS2 (0.571); COX13 (0.56); MRPL23 (0.554); MRM2 (0.527); ODC2 (0.525); MIC27 (0.497); PKP1 (0.493); PDR12 (0.489); QCR2 (0.457); CBP3 (0.453)
Homologues (species, bitscore): SLC25A29 (Homo sapiens, 148.7); Slc25a29 (Mus musculus, 146.7); slc25a20 (Danio rerio, 150.2); slc25a20.2 (Xenopus tropicalis, 153.3); colt (Drosophila melanogaster, 153.7); C54G10.4 (Caenorhabditis elegans, 147.5); BOU (Arabidopsis thaliana, 171.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:645419-646342:+ | gene-YPR058W_AKU4011 | rna-NM_001184155.1_AKU4011 | cds-NP_015383.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:251340-252263:- | gene-YPR058W_BG1 | rna-NM_001184155.1_BG1 | cds-NP_015383.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:723085-724008:+ | gene-YPR058W_Bruggeman | rna-NM_001184155.1_Bruggeman | cds-NP_015383.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:766539-767462:+ | gene-YPR058W_CAT1 | rna-NM_001184155.1_CAT1 | cds-NP_015383.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:649105-650028:+ | gene-YPR058W_CBS1585 | rna-NM_001184155.1_CBS1585 | cds-NP_015383.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:663481-664404:+ | gene-YPR058W_CBS436 | rna-NM_001184155.1_CBS436 | cds-NP_015383.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:652853-653776:+ | gene-YPR058W_CBS6412 | rna-NM_001184155.1_CBS6412 | cds-NP_015383.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:646054-646977:+ | gene-YPR058W_CBS6413 | rna-NM_001184155.1_CBS6413 | cds-NP_015383.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:673716-674639:+ | gene-YPR058W_CENPK1137D | rna-NM_001184155.1_CENPK1137D | cds-NP_015383.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:972610-973533:+ | gene-YPR058W_EthanolRed | rna-NM_001184155.1_EthanolRed | cds-NP_015383.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:651247-652170:+ | gene-YPR058W_FaliES1 | rna-NM_001184155.1_FaliES1 | cds-NP_015383.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000446.1:23201-24124:+ | gene-YPR058W_JAY291 | rna-NM_001184155.1_JAY291 | cds-NP_015383.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:664346-665269:+ | gene-YPR058W_MUCL30387 | rna-NM_001184155.1_MUCL30387 | cds-NP_015383.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:663050-663973:+ | gene-YPR058W_MUCL30388 | rna-NM_001184155.1_MUCL30388 | cds-NP_015383.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:642362-643285:+ | gene-YPR058W_MUCL39482 | rna-NM_001184155.1_MUCL39482 | cds-NP_015383.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:705187-706110:+ | gene-YPR058W_MUCL42920 | rna-NM_001184155.1_MUCL42920 | cds-NP_015383.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:673734-674657:+ | gene-YPR058W_NCIM3186 | rna-NM_001184155.1_NCIM3186 | cds-NP_015383.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:650292-651215:+ | gene-YPR058W_NCYC1407 | rna-NM_001184155.1_NCYC1407 | cds-NP_015383.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:656504-657427:+ | gene-YPR058W_PE2H3 | rna-NM_001184155.1_PE2H3 | cds-NP_015383.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:656152-657075:+ | gene-YPR058W_PE2H4 | rna-NM_001184155.1_PE2H4 | cds-NP_015383.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:673751-674674:+ | gene-YPR058W_S288C | rna-NM_001184155.1_S288C | cds-NP_015383.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000026.1:26017-26940:- | gene-YPR058W_SA1 | rna-NM_001184155.1_SA1 | cds-NP_015383.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:651022-651945:+ | gene-YPR058W_ThermosaccDry | rna-NM_001184155.1_ThermosaccDry | cds-NP_015383.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:667178-668101:+ | gene-YPR058W_VR1 | rna-NM_001184155.1_VR1 | cds-NP_015383.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:650248-651171:+ | gene-YPR058W_ZTW1 | rna-NM_001184155.1_ZTW1 | cds-NP_015383.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:651026-651949:+ | gene-YPR058W_Sparadoxus | rna-NM_001184155.1_Sparadoxus | cds-NP_015383.1_Sparadoxus | 91.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |