Gene name: YLR456W
Reference locus (S288C): YLR456W
Gene biotype: protein_coding
Description: Pyridoxamine 5'-phosphate oxidase YLR456W homolog; Protein of unknown function; predicted to encode a pyridoxal 5'-phosphate synthase based on sequence similarity but purified protein does not possess this activity, nor does it bind flavin mononucleotide (FMN); null mutant displays increased resistance to antifungal agents gliotoxin, cycloheximide and H2O2; YLR456W has a paralog, YPR172W, that arose from the whole genome duplication
Top 10 interactors (score): THI5 (0.9); THI11 (0.9); THI12 (0.9); BUD16 (0.9); THI13 (0.9); YOR345C (0.895); YGL072C (0.891); YGL235W (0.861); CUB1 (0.766); AIM26 (0.747); APL2 (0.696); MEF2 (0.657); IFA38 (0.568); DOC1 (0.487); YBR116C (0.485); YLR173W (0.453); YPL119C-A (0.451); YGR153W (0.451); YLR462W (0.45); MNC1 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:993354-993968:+ | gene-YLR456W_AKU4011 | rna-NM_001182344.1_AKU4011 | cds-NP_013561.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000002.1:3798-4412:- | gene-YLR456W_BG1 | rna-NM_001182344.1_BG1 | cds-NP_013561.1_BG1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:1032944-1033558:+ | gene-YLR456W_Bruggeman | rna-NM_001182344.1_Bruggeman | cds-NP_013561.1_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:1027994-1028608:+ | gene-YLR456W_CAT1 | rna-NM_001182344.1_CAT1 | cds-NP_013561.1_CAT1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:1028945-1029559:+ | gene-YLR456W_CBS1585 | rna-NM_001182344.1_CBS1585 | cds-NP_013561.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:1018587-1019201:+ | gene-YLR456W_CBS436 | rna-NM_001182344.1_CBS436 | cds-NP_013561.1_CBS436 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:1064974-1065588:+ | gene-YLR456W_CBS6412 | rna-NM_001182344.1_CBS6412 | cds-NP_013561.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:1029714-1030328:+ | gene-YLR456W_CBS6413 | rna-NM_001182344.1_CBS6413 | cds-NP_013561.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:1039700-1040314:+ | gene-YLR456W_CENPK1137D | rna-NM_001182344.1_CENPK1137D | cds-NP_013561.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:986371-986985:+ | gene-YLR456W_EthanolRed | rna-NM_001182344.1_EthanolRed | cds-NP_013561.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:1021642-1022256:+ | gene-YLR456W_FaliES1 | rna-NM_001182344.1_FaliES1 | cds-NP_013561.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000300.1:3675-4289:- | gene-YLR456W_JAY291 | rna-NM_001182344.1_JAY291 | cds-NP_013561.1_JAY291 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:1032425-1033039:+ | gene-YLR456W_MUCL30387 | rna-NM_001182344.1_MUCL30387 | cds-NP_013561.1_MUCL30387 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:1040337-1040951:+ | gene-YLR456W_MUCL30388 | rna-NM_001182344.1_MUCL30388 | cds-NP_013561.1_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:1030179-1030793:+ | gene-YLR456W_MUCL39482 | rna-NM_001182344.1_MUCL39482 | cds-NP_013561.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:1030628-1031242:+ | gene-YLR456W_MUCL42920 | rna-NM_001182344.1_MUCL42920 | cds-NP_013561.1_MUCL42920 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:1055044-1055658:+ | gene-YLR456W_NCIM3186 | rna-NM_001182344.1_NCIM3186 | cds-NP_013561.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:1039615-1040229:+ | gene-YLR456W_NCYC1407 | rna-NM_001182344.1_NCYC1407 | cds-NP_013561.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:1032308-1032922:+ | gene-YLR456W_PE2H3 | rna-NM_001182344.1_PE2H3 | cds-NP_013561.1_PE2H3 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:1032052-1032666:+ | gene-YLR456W_PE2H4 | rna-NM_001182344.1_PE2H4 | cds-NP_013561.1_PE2H4 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:1055070-1055684:+ | gene-YLR456W_S288C | rna-NM_001182344.1_S288C | cds-NP_013561.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000007.1:3803-4417:- | gene-YLR456W_SA1 | rna-NM_001182344.1_SA1 | cds-NP_013561.1_SA1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:1024720-1025334:+ | gene-YLR456W_ThermosaccDry | rna-NM_001182344.1_ThermosaccDry | cds-NP_013561.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:1031460-1032074:+ | gene-YLR456W_VR1 | rna-NM_001182344.1_VR1 | cds-NP_013561.1_VR1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:354972-355586:+ | gene-YLR456W_ZTW1 | rna-NM_001182344.1_ZTW1 | cds-NP_013561.1_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:1005040-1005654:+ | gene-YLR456W_Sparadoxus | rna-NM_001182344.1_Sparadoxus | cds-NP_013561.1_Sparadoxus | 87.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |