Gene name: YLR407W
Reference locus (S288C): YLR407W
Gene biotype: protein_coding
Description: Uncharacterized protein YLR407W; Putative protein of unknown function; null mutant displays elongated buds and a large fraction of budded cells have only one nucleus
Top 10 interactors (score): YMR099C (0.892); YNL234W (0.779); YGR283C (0.745); TAD2 (0.745); CKA2 (0.733); LCL1 (0.716); YMR102C (0.713); TMA23 (0.713); HPM1 (0.711); HOL1 (0.682); RTC2 (0.676); YGL235W (0.619); PEX31 (0.618); YIL152W (0.573); PIH1 (0.57); BTS1 (0.564); PKH2 (0.561); SWH1 (0.56); ERG28 (0.527); SCS2 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:882485-883171:+ | gene-YLR407W_AKU4011 | rna-NM_001182295.4_AKU4011 | cds-NP_013511.4_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000048.1:114646-115332:+ | gene-YLR407W_BG1 | rna-NM_001182295.4_BG1 | cds-NP_013511.4_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:920790-921476:+ | gene-YLR407W_Bruggeman | rna-NM_001182295.4_Bruggeman | cds-NP_013511.4_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:916332-917018:+ | gene-YLR407W_CAT1 | rna-NM_001182295.4_CAT1 | cds-NP_013511.4_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:918080-918766:+ | gene-YLR407W_CBS1585 | rna-NM_001182295.4_CBS1585 | cds-NP_013511.4_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:901737-902423:+ | gene-YLR407W_CBS436 | rna-NM_001182295.4_CBS436 | cds-NP_013511.4_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:954122-954808:+ | gene-YLR407W_CBS6412 | rna-NM_001182295.4_CBS6412 | cds-NP_013511.4_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:918372-919058:+ | gene-YLR407W_CBS6413 | rna-NM_001182295.4_CBS6413 | cds-NP_013511.4_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:917778-918464:+ | gene-YLR407W_CENPK1137D | rna-NM_001182295.4_CENPK1137D | cds-NP_013511.4_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:875028-875714:+ | gene-YLR407W_EthanolRed | rna-NM_001182295.4_EthanolRed | cds-NP_013511.4_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:904338-905024:+ | gene-YLR407W_FaliES1 | rna-NM_001182295.4_FaliES1 | cds-NP_013511.4_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000434.1:57495-58181:+ | gene-YLR407W_JAY291 | rna-NM_001182295.4_JAY291 | cds-NP_013511.4_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:919656-920342:+ | gene-YLR407W_MUCL30387 | rna-NM_001182295.4_MUCL30387 | cds-NP_013511.4_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:925754-926440:+ | gene-YLR407W_MUCL30388 | rna-NM_001182295.4_MUCL30388 | cds-NP_013511.4_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:919300-919986:+ | gene-YLR407W_MUCL39482 | rna-NM_001182295.4_MUCL39482 | cds-NP_013511.4_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:913956-914642:+ | gene-YLR407W_MUCL42920 | rna-NM_001182295.4_MUCL42920 | cds-NP_013511.4_MUCL42920 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:932941-933627:+ | gene-YLR407W_NCIM3186 | rna-NM_001182295.4_NCIM3186 | cds-NP_013511.4_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:928481-929167:+ | gene-YLR407W_NCYC1407 | rna-NM_001182295.4_NCYC1407 | cds-NP_013511.4_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:914876-915562:+ | gene-YLR407W_PE2H3 | rna-NM_001182295.4_PE2H3 | cds-NP_013511.4_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:914620-915306:+ | gene-YLR407W_PE2H4 | rna-NM_001182295.4_PE2H4 | cds-NP_013511.4_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:932967-933653:+ | gene-YLR407W_S288C | rna-NM_001182295.4_S288C | cds-NP_013511.4_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000007.1:115052-115738:- | gene-YLR407W_SA1 | rna-NM_001182295.4_SA1 | cds-NP_013511.4_SA1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:907417-908103:+ | gene-YLR407W_ThermosaccDry | rna-NM_001182295.4_ThermosaccDry | cds-NP_013511.4_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:919966-920652:+ | gene-YLR407W_VR1 | rna-NM_001182295.4_VR1 | cds-NP_013511.4_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:244134-244820:+ | gene-YLR407W_ZTW1 | rna-NM_001182295.4_ZTW1 | cds-NP_013511.4_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:892941-893627:+ | gene-YLR407W_Sparadoxus | rna-NM_001182295.4_Sparadoxus | cds-NP_013511.4_Sparadoxus | 91.2 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |