YLR379W-A (YLR379W-A)

Gene profile

Gene name: YLR379W-A
Reference locus (S288C): YLR379W-A
Gene biotype: protein_coding

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005306.1:826980-827252:+ gene-YLR379W-A_AKU4011 rna-NM_001395038.1_AKU4011 cds-NP_001381968.1_AKU4011 98.5 100.0 Mismatch 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000048.1:59158-59428:+ gene-YLR379W-A_BG1 rna-NM_001395038.1_BG1 cds-NP_001381968.1_BG1 97.0 99.2 Unannotated 1 1 0 False False False True False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005514.1:865314-865583:+ gene-YLR379W-A_Bruggeman rna-NM_001395038.1_Bruggeman cds-NP_001381968.1_Bruggeman 94.2 97.8 Mismatch 1 1 0 False False False True False
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:860810-861080:+ gene-YLR379W-A_CAT1 rna-NM_001395038.1_CAT1 cds-NP_001381968.1_CAT1 97.0 99.2 Unannotated 1 1 0 False False False True False
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:862574-862846:+ gene-YLR379W-A_CBS1585 rna-NM_001395038.1_CBS1585 cds-NP_001381968.1_CBS1585 98.5 100.0 Mismatch 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005354.1:846216-846486:+ gene-YLR379W-A_CBS436 rna-NM_001395038.1_CBS436 cds-NP_001381968.1_CBS436 97.0 99.2 Unannotated 1 1 0 False False False True False
CBS6412 GCA_001738345.1 Sake Asia CM005338.1:898996-899268:+ gene-YLR379W-A_CBS6412 rna-NM_001395038.1_CBS6412 cds-NP_001381968.1_CBS6412 98.1 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005322.1:862865-863137:+ gene-YLR379W-A_CBS6413 rna-NM_001395038.1_CBS6413 cds-NP_001381968.1_CBS6413 98.5 100.0 Mismatch 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001533.1:862216-862485:+ gene-YLR379W-A_CENPK1137D rna-NM_001395038.1_CENPK1137D cds-NP_001381968.1_CENPK1137D 94.2 97.8 Mismatch 1 1 0 False False False True False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005482.1:819739-820008:+ gene-YLR379W-A_EthanolRed rna-NM_001395038.1_EthanolRed cds-NP_001381968.1_EthanolRed 94.2 97.8 Mismatch 1 1 0 False False False True False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005546.1:848862-849131:+ gene-YLR379W-A_FaliES1 rna-NM_001395038.1_FaliES1 cds-NP_001381968.1_FaliES1 94.2 97.8 Mismatch 1 1 0 False False False True False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000434.1:1991-2261:+ gene-YLR379W-A_JAY291 rna-NM_001395038.1_JAY291 cds-NP_001381968.1_JAY291 96.7 99.2 Unannotated 1 1 0 False False False True False
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000355.1:110-380:+ gene-YLR379W-A_MUCL30387 rna-NM_001395038.1_MUCL30387 cds-NP_001381968.1_MUCL30387 97.0 99.2 Unannotated 1 1 0 False False False True False
MUCL30388 GCA_001738495.1 Bread Europe CM005450.1:870268-870537:+ gene-YLR379W-A_MUCL30388 rna-NM_001395038.1_MUCL30388 cds-NP_001381968.1_MUCL30388 94.5 97.8 Mismatch 1 1 0 False False False True False
MUCL39482 GCA_001738235.1 Sake Asia CM005290.1:863794-864066:+ gene-YLR379W-A_MUCL39482 rna-NM_001395038.1_MUCL39482 cds-NP_001381968.1_MUCL39482 98.5 100.0 Mismatch 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:858485-858754:+ gene-YLR379W-A_MUCL42920 rna-NM_001395038.1_MUCL42920 cds-NP_001381968.1_MUCL42920 94.2 97.8 Mismatch 1 1 0 False False False True False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:877418-877690:+ gene-YLR379W-A_NCIM3186 rna-NM_001395038.1_NCIM3186 cds-NP_001381968.1_NCIM3186 98.1 100.0 Mismatch 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005274.1:872976-873248:+ gene-YLR379W-A_NCYC1407 rna-NM_001395038.1_NCYC1407 cds-NP_001381968.1_NCYC1407 98.5 100.0 Mismatch 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:859370-859640:+ gene-YLR379W-A_PE2H3 rna-NM_001395038.1_PE2H3 cds-NP_001381968.1_PE2H3 96.7 99.2 Unannotated 1 1 0 False False False True False
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:859114-859384:+ gene-YLR379W-A_PE2H4 rna-NM_001395038.1_PE2H4 cds-NP_001381968.1_PE2H4 96.7 99.2 Unannotated 1 1 0 False False False True False
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:877444-877716:+ gene-YLR379W-A_S288C rna-NM_001395038.1_S288C cds-NP_001381968.1_S288C 100.0 100.0 Mismatch 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000007.1:170975-171245:- gene-YLR379W-A_SA1 rna-NM_001395038.1_SA1 cds-NP_001381968.1_SA1 97.0 99.2 Unannotated 1 1 0 False False False True False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005498.1:851941-852210:+ gene-YLR379W-A_ThermosaccDry rna-NM_001395038.1_ThermosaccDry cds-NP_001381968.1_ThermosaccDry 94.2 97.8 Mismatch 1 1 0 False False False True False
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:864460-864730:+ gene-YLR379W-A_VR1 rna-NM_001395038.1_VR1 cds-NP_001381968.1_VR1 96.7 99.2 Unannotated 1 1 0 False False False True False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000025.1:188628-188900:+ gene-YLR379W-A_ZTW1 rna-NM_001395038.1_ZTW1 cds-NP_001381968.1_ZTW1 98.9 100.0 Mismatch 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047498.1:837361-837613:+ gene-YLR379W-A_Sparadoxus rna-NM_001395038.1_Sparadoxus cds-NP_001381968.1_Sparadoxus 72.3 91.9 Mismatch 1 1 0 False False False True False

Additional files