YLR358C (YLR358C)


Gene profile

Gene name: YLR358C
Reference locus (S288C): YLR358C
Gene biotype: protein_coding

Description: Uncharacterized protein YLR358C; Protein of unknown function; expressed at both mRNA and protein levels; partially overlaps ORF RSC2/YLR357W

Top 10 interactors (score): YGL177W (0.892); YIL054W (0.815); YHR173C (0.815); YNL140C (0.813); YER084W (0.78); YOR105W (0.78); N1795 (0.762); YNL184C (0.762); YJR146W (0.749); SRP40 (0.745); YPR089W (0.745); JIP4 (0.744); DSS4 (0.714); TPH3 (0.713); YEL068C (0.692); YOR318C (0.575); NAT3 (0.573); CRS5 (0.572); YVC1 (0.57); GRX7 (0.568)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005306.1:793032-793595:- gene-YLR358C_AKU4011 rna-NM_001270756.1_AKU4011 cds-NP_001257685.1_AKU4011 100.0 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000048.1:25158-25721:- gene-YLR358C_BG1 rna-NM_001270756.1_BG1 cds-NP_001257685.1_BG1 99.6 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005514.1:831330-831893:- gene-YLR358C_Bruggeman rna-NM_001270756.1_Bruggeman cds-NP_001257685.1_Bruggeman 99.8 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:826834-827397:- gene-YLR358C_CAT1 rna-NM_001270756.1_CAT1 cds-NP_001257685.1_CAT1 99.6 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:828024-828587:- gene-YLR358C_CBS1585 rna-NM_001270756.1_CBS1585 cds-NP_001257685.1_CBS1585 100.0 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005354.1:812239-812802:- gene-YLR358C_CBS436 rna-NM_001270756.1_CBS436 cds-NP_001257685.1_CBS436 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005338.1:865031-865594:- gene-YLR358C_CBS6412 rna-NM_001270756.1_CBS6412 cds-NP_001257685.1_CBS6412 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005322.1:828915-829478:- gene-YLR358C_CBS6413 rna-NM_001270756.1_CBS6413 cds-NP_001257685.1_CBS6413 100.0 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001533.1:828188-828751:- gene-YLR358C_CENPK1137D rna-NM_001270756.1_CENPK1137D cds-NP_001257685.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005482.1:785594-786157:- gene-YLR358C_EthanolRed rna-NM_001270756.1_EthanolRed cds-NP_001257685.1_EthanolRed 100.0 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005546.1:814399-814962:- gene-YLR358C_FaliES1 rna-NM_001270756.1_FaliES1 cds-NP_001257685.1_FaliES1 100.0 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000161.1:24975-25538:- gene-YLR358C_JAY291 rna-NM_001270756.1_JAY291 cds-NP_001257685.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005418.1:828745-829308:- gene-YLR358C_MUCL30387 rna-NM_001270756.1_MUCL30387 cds-NP_001257685.1_MUCL30387 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005450.1:834363-834926:- gene-YLR358C_MUCL30388 rna-NM_001270756.1_MUCL30388 cds-NP_001257685.1_MUCL30388 99.6 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005290.1:829243-829806:- gene-YLR358C_MUCL39482 rna-NM_001270756.1_MUCL39482 cds-NP_001257685.1_MUCL39482 100.0 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:824521-825084:- gene-YLR358C_MUCL42920 rna-NM_001270756.1_MUCL42920 cds-NP_001257685.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:843461-844024:- gene-YLR358C_NCIM3186 rna-NM_001270756.1_NCIM3186 cds-NP_001257685.1_NCIM3186 100.0 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005274.1:838463-839026:- gene-YLR358C_NCYC1407 rna-NM_001270756.1_NCYC1407 cds-NP_001257685.1_NCYC1407 100.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:825396-825959:- gene-YLR358C_PE2H3 rna-NM_001270756.1_PE2H3 cds-NP_001257685.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:825140-825703:- gene-YLR358C_PE2H4 rna-NM_001270756.1_PE2H4 cds-NP_001257685.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:843487-844050:- gene-YLR358C_S288C rna-NM_001270756.1_S288C cds-NP_001257685.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000007.1:204657-205220:+ gene-YLR358C_SA1 rna-NM_001270756.1_SA1 cds-NP_001257685.1_SA1 99.6 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005498.1:817237-817800:- gene-YLR358C_ThermosaccDry rna-NM_001270756.1_ThermosaccDry cds-NP_001257685.1_ThermosaccDry 99.8 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:830503-831066:- gene-YLR358C_VR1 rna-NM_001270756.1_VR1 cds-NP_001257685.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000025.1:154679-155242:- gene-YLR358C_ZTW1 rna-NM_001270756.1_ZTW1 cds-NP_001257685.1_ZTW1 100.0 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047498.1:803300-803862:- gene-YLR358C_Sparadoxus rna-NM_001270756.1_Sparadoxus cds-NP_001257685.1_Sparadoxus 89.8 99.8 Unannotated 1 1 0 False False True False False

Additional files