Gene name: YLR297W
Reference locus (S288C): YLR297W
Gene biotype: protein_coding
Description: Uncharacterized vacuolar protein YLR297W; Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole; not an essential gene; induced by treatment with 8-methoxypsoralen and UVA irradiation; relocalizes from nucleus to vacuole upon DNA replication stress; YLR297W has a paralog, YOR186W, that arose from the whole genome duplication
Top 10 interactors (score): YDR222W (0.824); TDA6 (0.772); YRO2 (0.733); CGR1 (0.714); ECM4 (0.704); HSP30 (0.683); HUG1 (0.671); TPO3 (0.663); TPO2 (0.636); HAA1 (0.569)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:672850-673239:+ | gene-YLR297W_AKU4011 | rna-NM_001182185.1_AKU4011 | cds-NP_013400.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000170.1:59407-59796:- | gene-YLR297W_BG1 | rna-NM_001182185.1_BG1 | cds-NP_013400.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:708682-709071:+ | gene-YLR297W_Bruggeman | rna-NM_001182185.1_Bruggeman | cds-NP_013400.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:706592-706981:+ | gene-YLR297W_CAT1 | rna-NM_001182185.1_CAT1 | cds-NP_013400.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:707776-708165:+ | gene-YLR297W_CBS1585 | rna-NM_001182185.1_CBS1585 | cds-NP_013400.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:692372-692761:+ | gene-YLR297W_CBS436 | rna-NM_001182185.1_CBS436 | cds-NP_013400.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:670416-670805:+ | gene-YLR297W_CBS6412 | rna-NM_001182185.1_CBS6412 | cds-NP_013400.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:708442-708831:+ | gene-YLR297W_CBS6413 | rna-NM_001182185.1_CBS6413 | cds-NP_013400.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:708638-709027:+ | gene-YLR297W_CENPK1137D | rna-NM_001182185.1_CENPK1137D | cds-NP_013400.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:666128-666517:+ | gene-YLR297W_EthanolRed | rna-NM_001182185.1_EthanolRed | cds-NP_013400.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:695328-695717:+ | gene-YLR297W_FaliES1 | rna-NM_001182185.1_FaliES1 | cds-NP_013400.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000359.1:10061-10450:- | gene-YLR297W_JAY291 | rna-NM_001182185.1_JAY291 | cds-NP_013400.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:707916-708305:+ | gene-YLR297W_MUCL30387 | rna-NM_001182185.1_MUCL30387 | cds-NP_013400.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:713498-713887:+ | gene-YLR297W_MUCL30388 | rna-NM_001182185.1_MUCL30388 | cds-NP_013400.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:709006-709395:+ | gene-YLR297W_MUCL39482 | rna-NM_001182185.1_MUCL39482 | cds-NP_013400.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:704164-704553:+ | gene-YLR297W_MUCL42920 | rna-NM_001182185.1_MUCL42920 | cds-NP_013400.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:724018-724407:+ | gene-YLR297W_NCIM3186 | rna-NM_001182185.1_NCIM3186 | cds-NP_013400.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:718348-718737:+ | gene-YLR297W_NCYC1407 | rna-NM_001182185.1_NCYC1407 | cds-NP_013400.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:706139-706528:+ | gene-YLR297W_PE2H3 | rna-NM_001182185.1_PE2H3 | cds-NP_013400.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:705883-706272:+ | gene-YLR297W_PE2H4 | rna-NM_001182185.1_PE2H4 | cds-NP_013400.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:724044-724433:+ | gene-YLR297W_S288C | rna-NM_001182185.1_S288C | cds-NP_013400.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000039.1:60256-60645:- | gene-YLR297W_SA1 | rna-NM_001182185.1_SA1 | cds-NP_013400.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:697222-697611:+ | gene-YLR297W_ThermosaccDry | rna-NM_001182185.1_ThermosaccDry | cds-NP_013400.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:709109-709498:+ | gene-YLR297W_VR1 | rna-NM_001182185.1_VR1 | cds-NP_013400.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:35650-36039:+ | gene-YLR297W_ZTW1 | rna-NM_001182185.1_ZTW1 | cds-NP_013400.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:683251-683640:+ | gene-YLR297W_Sparadoxus | rna-NM_001182185.1_Sparadoxus | cds-NP_013400.1_Sparadoxus | 86.2 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |