YLR296W (YLR296W)

Gene profile

Gene name: YLR296W
Reference locus (S288C): YLR296W
Gene biotype: protein_coding

Description: Uncharacterized protein YLR296W; Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data

Top 10 interactors (score): YPR027C (0.945); YIR040C (0.945); YDR215C (0.942); YBL044W (0.936)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005306.1:671780-672110:+ gene-YLR296W_AKU4011 rna-NM_001348859.1_AKU4011 cds-NP_001335799.1_AKU4011 98.4 100.0 Unannotated 1 1 0 False False False True False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000170.1:60536-60910:- gene-YLR296W_BG1 rna-NM_001348859.1_BG1 cds-NP_001335799.1_BG1 86.1 100.0 Unannotated 1 1 0 False False False False True
Bruggeman GCA_001738585.1 Bread Not Applicable CM005514.1:707620-707942:+ gene-YLR296W_Bruggeman rna-NM_001348859.1_Bruggeman cds-NP_001335799.1_Bruggeman 98.4 98.7 Unannotated 1 1 0 False False False True False
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:705529-705852:+ gene-YLR296W_CAT1 rna-NM_001348859.1_CAT1 cds-NP_001335799.1_CAT1 97.2 98.7 Unannotated 1 1 0 False False False False True
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:706712-707036:+ gene-YLR296W_CBS1585 rna-NM_001348859.1_CBS1585 cds-NP_001335799.1_CBS1585 99.0 99.3 Unannotated 1 1 0 False False True False False
CBS436 GCA_001738355.1 Sake Asia CM005354.1:691308-691632:+ gene-YLR296W_CBS436 rna-NM_001348859.1_CBS436 cds-NP_001335799.1_CBS436 96.6 98.7 Unannotated 1 1 0 False False False True False
CBS6412 GCA_001738345.1 Sake Asia CM005338.1:669349-669676:+ gene-YLR296W_CBS6412 rna-NM_001348859.1_CBS6412 cds-NP_001335799.1_CBS6412 97.2 99.6 Unannotated 1 1 0 False False False True False
CBS6413 GCA_001738265.1 Sake Asia CM005322.1:707378-707702:+ gene-YLR296W_CBS6413 rna-NM_001348859.1_CBS6413 cds-NP_001335799.1_CBS6413 99.0 99.3 Unannotated 1 1 0 False False True False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001533.1:707574-707898:+ gene-YLR296W_CENPK1137D rna-NM_001348859.1_CENPK1137D cds-NP_001335799.1_CENPK1137D 99.3 99.3 Unannotated 1 1 0 False False False True False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005482.1:665060-665388:+ gene-YLR296W_EthanolRed rna-NM_001348859.1_EthanolRed cds-NP_001335799.1_EthanolRed 97.5 99.6 Unannotated 1 1 0 False False False True False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005546.1:694260-694588:+ gene-YLR296W_FaliES1 rna-NM_001348859.1_FaliES1 cds-NP_001335799.1_FaliES1 98.4 99.6 Unannotated 1 1 0 False False False True False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000359.1:11189-11511:- gene-YLR296W_JAY291 rna-NM_001348859.1_JAY291 cds-NP_001335799.1_JAY291 97.5 98.7 Unannotated 1 1 0 False False False True False
MUCL30387 GCA_001738515.1 Bread Europe CM005418.1:706853-707176:+ gene-YLR296W_MUCL30387 rna-NM_001348859.1_MUCL30387 cds-NP_001335799.1_MUCL30387 96.9 98.7 Unannotated 1 1 0 False False False False True
MUCL30388 GCA_001738495.1 Bread Europe CM005450.1:712434-712758:+ gene-YLR296W_MUCL30388 rna-NM_001348859.1_MUCL30388 cds-NP_001335799.1_MUCL30388 99.3 99.3 Unannotated 1 1 0 False False False True False
MUCL39482 GCA_001738235.1 Sake Asia CM005290.1:707943-708266:+ gene-YLR296W_MUCL39482 rna-NM_001348859.1_MUCL39482 cds-NP_001335799.1_MUCL39482 98.7 99.0 Unannotated 1 1 0 False False True False False
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:703102-703424:+ gene-YLR296W_MUCL42920 rna-NM_001348859.1_MUCL42920 cds-NP_001335799.1_MUCL42920 98.1 98.7 Unannotated 1 1 0 False False False True False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:722952-723278:+ gene-YLR296W_NCIM3186 rna-NM_001348859.1_NCIM3186 cds-NP_001335799.1_NCIM3186 100.0 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005274.1:717278-717608:+ gene-YLR296W_NCYC1407 rna-NM_001348859.1_NCYC1407 cds-NP_001335799.1_NCYC1407 98.1 100.0 Unannotated 1 1 0 False False False True False
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:705076-705399:+ gene-YLR296W_PE2H3 rna-NM_001348859.1_PE2H3 cds-NP_001335799.1_PE2H3 97.2 98.7 Unannotated 1 1 0 False False False False True
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:704820-705143:+ gene-YLR296W_PE2H4 rna-NM_001348859.1_PE2H4 cds-NP_001335799.1_PE2H4 97.2 98.7 Unannotated 1 1 0 False False False False True
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:722978-723304:+ gene-YLR296W_S288C rna-NM_001348859.1_S288C cds-NP_001335799.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000039.1:61385-61710:- gene-YLR296W_SA1 rna-NM_001348859.1_SA1 cds-NP_001335799.1_SA1 98.7 99.3 Unannotated 1 1 0 False False False True False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005498.1:696155-696482:+ gene-YLR296W_ThermosaccDry rna-NM_001348859.1_ThermosaccDry cds-NP_001335799.1_ThermosaccDry 98.7 99.6 Unannotated 1 1 0 False False False True False
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:708046-708369:+ gene-YLR296W_VR1 rna-NM_001348859.1_VR1 cds-NP_001335799.1_VR1 97.2 98.7 Unannotated 1 1 0 False False False False True
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000025.1:34589-34910:+ gene-YLR296W_ZTW1 rna-NM_001348859.1_ZTW1 cds-NP_001335799.1_ZTW1 97.5 98.4 Unannotated 1 1 0 False False False True False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047498.1:682188-682514:+ gene-YLR296W_Sparadoxus rna-NM_001348859.1_Sparadoxus cds-NP_001335799.1_Sparadoxus 85.9 99.6 Unannotated 1 1 0 False False False True False

Additional files