Gene name: YLR278C
Reference locus (S288C): YLR278C
Gene biotype: protein_coding
Description: Uncharacterized transcriptional regulatory protein YLR278C; Zinc-cluster protein; GFP-fusion protein localizes to the nucleus; mutant shows moderate growth defect on caffeine; has a prion-domain like fragment that increases frequency of [URE3]; YLR278C is not an essential gene
Top 10 interactors (score): RDR1 (0.813); STB5 (0.808); LEU3 (0.788); URC2 (0.748); CAT8 (0.718); TBS1 (0.712); ERT1 (0.712); RDS2 (0.71); YLL054C (0.693); AIM21 (0.671); SIP4 (0.67); UPC2 (0.62); GAL4 (0.617); EDS1 (0.593); YNR063W (0.573); FBP1 (0.572); PDR3 (0.569); YOR292C (0.568); YER134C (0.562); PCK1 (0.528)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:648836-652841:- | gene-YLR278C_AKU4011 | rna-NM_001182165.1_AKU4011 | cds-NP_013380.1_AKU4011 | 99.0 | 99.5 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000170.1:79805-83815:+ | gene-YLR278C_BG1 | rna-NM_001182165.1_BG1 | cds-NP_013380.1_BG1 | 99.0 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:683788-687816:- | gene-YLR278C_Bruggeman | rna-NM_001182165.1_Bruggeman | cds-NP_013380.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:682612-686637:- | gene-YLR278C_CAT1 | rna-NM_001182165.1_CAT1 | cds-NP_013380.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:683749-687777:- | gene-YLR278C_CBS1585 | rna-NM_001182165.1_CBS1585 | cds-NP_013380.1_CBS1585 | 98.5 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:668384-672412:- | gene-YLR278C_CBS436 | rna-NM_001182165.1_CBS436 | cds-NP_013380.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:646405-650412:- | gene-YLR278C_CBS6412 | rna-NM_001182165.1_CBS6412 | cds-NP_013380.1_CBS6412 | 98.9 | 99.5 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:684413-688441:- | gene-YLR278C_CBS6413 | rna-NM_001182165.1_CBS6413 | cds-NP_013380.1_CBS6413 | 98.5 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:684604-688629:- | gene-YLR278C_CENPK1137D | rna-NM_001182165.1_CENPK1137D | cds-NP_013380.1_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:642330-646150:- | gene-YLR278C_EthanolRed | rna-NM_001182165.1_EthanolRed | cds-NP_013380.1_EthanolRed | 94.3 | 94.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:671323-675351:- | gene-YLR278C_FaliES1 | rna-NM_001182165.1_FaliES1 | cds-NP_013380.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000359.1:30410-34441:+ | gene-YLR278C_JAY291 | rna-NM_001182165.1_JAY291 | cds-NP_013380.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:683928-687956:- | gene-YLR278C_MUCL30387 | rna-NM_001182165.1_MUCL30387 | cds-NP_013380.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:689280-693305:- | gene-YLR278C_MUCL30388 | rna-NM_001182165.1_MUCL30388 | cds-NP_013380.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:685001-689008:- | gene-YLR278C_MUCL39482 | rna-NM_001182165.1_MUCL39482 | cds-NP_013380.1_MUCL39482 | 99.0 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:680180-684205:- | gene-YLR278C_MUCL42920 | rna-NM_001182165.1_MUCL42920 | cds-NP_013380.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:699973-703998:- | gene-YLR278C_NCIM3186 | rna-NM_001182165.1_NCIM3186 | cds-NP_013380.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:694319-698341:- | gene-YLR278C_NCYC1407 | rna-NM_001182165.1_NCYC1407 | cds-NP_013380.1_NCYC1407 | 99.4 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:682144-686175:- | gene-YLR278C_PE2H3 | rna-NM_001182165.1_PE2H3 | cds-NP_013380.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:681888-685919:- | gene-YLR278C_PE2H4 | rna-NM_001182165.1_PE2H4 | cds-NP_013380.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:699999-704024:- | gene-YLR278C_S288C | rna-NM_001182165.1_S288C | cds-NP_013380.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000039.1:80601-84629:+ | gene-YLR278C_SA1 | rna-NM_001182165.1_SA1 | cds-NP_013380.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:673239-677246:- | gene-YLR278C_ThermosaccDry | rna-NM_001182165.1_ThermosaccDry | cds-NP_013380.1_ThermosaccDry | 98.9 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:685105-689130:- | gene-YLR278C_VR1 | rna-NM_001182165.1_VR1 | cds-NP_013380.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:11627-15652:- | gene-YLR278C_ZTW1 | rna-NM_001182165.1_ZTW1 | cds-NP_013380.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:659337-663296:- | gene-YLR278C_Sparadoxus | rna-NM_001182165.1_Sparadoxus | cds-NP_013380.1_Sparadoxus | 86.9 | 97.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |