YLR257W (YLR257W)


Gene profile

Gene name: YLR257W
Reference locus (S288C): YLR257W
Gene biotype: protein_coding

Description: Uncharacterized protein YLR257W; Protein of unknown function; protein abundance increases in response to DNA replication stress

Top 10 interactors (score): YOL014W (0.747); YGR017W (0.746); YHR097C (0.738); DIA1 (0.716); YNL208W (0.71); LCL1 (0.699); YMR295C (0.696); TMA10 (0.617); FLC1 (0.573); YLR345W (0.544); GDH2 (0.534); RET2 (0.526); SPT21 (0.525); SOL2 (0.495); RCK2 (0.49); RIM20 (0.487); CRH1 (0.482); SUR1 (0.48); YPS1 (0.475); BNI4 (0.461)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005306.1:607114-608079:+ gene-YLR257W_AKU4011 rna-NM_001182144.1_AKU4011 cds-NP_013358.1_AKU4011 99.8 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000170.1:123811-124776:- gene-YLR257W_BG1 rna-NM_001182144.1_BG1 cds-NP_013358.1_BG1 99.7 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005514.1:641360-642325:+ gene-YLR257W_Bruggeman rna-NM_001182144.1_Bruggeman cds-NP_013358.1_Bruggeman 99.8 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:640505-641470:+ gene-YLR257W_CAT1 rna-NM_001182144.1_CAT1 cds-NP_013358.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:642609-643574:+ gene-YLR257W_CBS1585 rna-NM_001182144.1_CBS1585 cds-NP_013358.1_CBS1585 99.8 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005354.1:626835-627800:+ gene-YLR257W_CBS436 rna-NM_001182144.1_CBS436 cds-NP_013358.1_CBS436 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005338.1:605584-606549:+ gene-YLR257W_CBS6412 rna-NM_001182144.1_CBS6412 cds-NP_013358.1_CBS6412 99.8 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005322.1:642905-643870:+ gene-YLR257W_CBS6413 rna-NM_001182144.1_CBS6413 cds-NP_013358.1_CBS6413 99.7 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001533.1:643435-644400:+ gene-YLR257W_CENPK1137D rna-NM_001182144.1_CENPK1137D cds-NP_013358.1_CENPK1137D 99.7 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005482.1:601216-602181:+ gene-YLR257W_EthanolRed rna-NM_001182144.1_EthanolRed cds-NP_013358.1_EthanolRed 100.0 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005546.1:630053-631018:+ gene-YLR257W_FaliES1 rna-NM_001182144.1_FaliES1 cds-NP_013358.1_FaliES1 100.0 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000136.1:28335-29300:- gene-YLR257W_JAY291 rna-NM_001182144.1_JAY291 cds-NP_013358.1_JAY291 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005418.1:642220-643185:+ gene-YLR257W_MUCL30387 rna-NM_001182144.1_MUCL30387 cds-NP_013358.1_MUCL30387 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005450.1:646975-647940:+ gene-YLR257W_MUCL30388 rna-NM_001182144.1_MUCL30388 cds-NP_013358.1_MUCL30388 99.6 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005290.1:643590-644555:+ gene-YLR257W_MUCL39482 rna-NM_001182144.1_MUCL39482 cds-NP_013358.1_MUCL39482 99.8 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:638362-639327:+ gene-YLR257W_MUCL42920 rna-NM_001182144.1_MUCL42920 cds-NP_013358.1_MUCL42920 99.7 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:658800-659765:+ gene-YLR257W_NCIM3186 rna-NM_001182144.1_NCIM3186 cds-NP_013358.1_NCIM3186 99.6 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005274.1:630577-631542:+ gene-YLR257W_NCYC1407 rna-NM_001182144.1_NCYC1407 cds-NP_013358.1_NCYC1407 99.7 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:634311-635276:+ gene-YLR257W_PE2H3 rna-NM_001182144.1_PE2H3 cds-NP_013358.1_PE2H3 99.7 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:634055-635020:+ gene-YLR257W_PE2H4 rna-NM_001182144.1_PE2H4 cds-NP_013358.1_PE2H4 99.7 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:658826-659791:+ gene-YLR257W_S288C rna-NM_001182144.1_S288C cds-NP_013358.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000013.1:28581-29546:- gene-YLR257W_SA1 rna-NM_001182144.1_SA1 cds-NP_013358.1_SA1 99.7 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005498.1:632061-633026:+ gene-YLR257W_ThermosaccDry rna-NM_001182144.1_ThermosaccDry cds-NP_013358.1_ThermosaccDry 100.0 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:643425-644390:+ gene-YLR257W_VR1 rna-NM_001182144.1_VR1 cds-NP_013358.1_VR1 99.7 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000024.1:156373-157338:+ gene-YLR257W_ZTW1 rna-NM_001182144.1_ZTW1 cds-NP_013358.1_ZTW1 100.0 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047498.1:617915-618888:+ gene-YLR257W_Sparadoxus rna-NM_001182144.1_Sparadoxus cds-NP_013358.1_Sparadoxus 90.3 100.0 Unannotated 1 1 0 False False False True False

Additional files