Gene name: YLR256W-A
Reference locus (S288C): YLR256W-A
Gene biotype: protein_coding
Description: Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag
Top 10 interactors (score): URK1 (0.818); CDD1 (0.749); DBP1 (0.748); URH1 (0.746); BFR1 (0.713); FCY1 (0.699); SRO9 (0.694); MBF1 (0.692); FCY2 (0.655); HEK2 (0.598); SCP160 (0.573); PUB1 (0.569); NHP6A (0.566); SUB2 (0.526); PUF3 (0.525); CBP2 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:196582-197904:+ | gene-YLR256W-A_NCIM3186 | rna-NM_001184409.1_NCIM3186 | cds-NP_058173.1_NCIM3186 | 72.2 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:651117-652439:+ | gene-YLR256W-A_S288C | rna-NM_001184409.1_S288C | cds-NP_058173.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |