Gene name: YLR227W-B
Reference locus (S288C): YLR227W-B
Gene biotype: protein_coding
Description: Transposon Ty1-LR3 Gag-Pol polyprotein; Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes
Top 10 interactors (score): Unknown
Homologues (species, bitscore): CRK8 (Arabidopsis thaliana, 92.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:593438-598706:+ | gene-YLR227W-B_S288C | rna-NM_001184408.2_S288C | cds-NP_058171.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | MBVZ01000076.1:1-846:+ | gene-YLR227W-B_VR1 | rna-NM_001184408.2_VR1 | cds-NP_058171.1_VR1 | 15.7 | 16.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |