Gene name: YLR225C
Reference locus (S288C): YLR225C
Gene biotype: protein_coding
Description: Uncharacterized SVF1-like protein YLR225C; Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; not an essential gene; YLR225C has a paralog, YDR222W, that arose from the whole genome duplication; Belongs to the SVF1 family
Top 10 interactors (score): Unknown
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:541841-543064:- | gene-YLR225C_AKU4011 | rna-NM_001182112.1_AKU4011 | cds-NP_013326.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000082.1:1776-2999:- | gene-YLR225C_BG1 | rna-NM_001182112.1_BG1 | cds-NP_013326.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:582063-583286:- | gene-YLR225C_Bruggeman | rna-NM_001182112.1_Bruggeman | cds-NP_013326.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:581712-582935:- | gene-YLR225C_CAT1 | rna-NM_001182112.1_CAT1 | cds-NP_013326.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:577335-578558:- | gene-YLR225C_CBS1585 | rna-NM_001182112.1_CBS1585 | cds-NP_013326.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:567530-568753:- | gene-YLR225C_CBS436 | rna-NM_001182112.1_CBS436 | cds-NP_013326.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:545896-547119:- | gene-YLR225C_CBS6412 | rna-NM_001182112.1_CBS6412 | cds-NP_013326.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:577630-578853:- | gene-YLR225C_CBS6413 | rna-NM_001182112.1_CBS6413 | cds-NP_013326.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:572411-573634:- | gene-YLR225C_CENPK1137D | rna-NM_001182112.1_CENPK1137D | cds-NP_013326.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:541355-542578:- | gene-YLR225C_EthanolRed | rna-NM_001182112.1_EthanolRed | cds-NP_013326.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:570280-571503:- | gene-YLR225C_FaliES1 | rna-NM_001182112.1_FaliES1 | cds-NP_013326.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000004.1:97202-98425:- | gene-YLR225C_JAY291 | rna-NM_001182112.1_JAY291 | cds-NP_013326.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:582923-584146:- | gene-YLR225C_MUCL30387 | rna-NM_001182112.1_MUCL30387 | cds-NP_013326.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:587043-588266:- | gene-YLR225C_MUCL30388 | rna-NM_001182112.1_MUCL30388 | cds-NP_013326.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:578316-579539:- | gene-YLR225C_MUCL39482 | rna-NM_001182112.1_MUCL39482 | cds-NP_013326.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:578813-580036:- | gene-YLR225C_MUCL42920 | rna-NM_001182112.1_MUCL42920 | cds-NP_013326.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:587669-588892:- | gene-YLR225C_NCIM3186 | rna-NM_001182112.1_NCIM3186 | cds-NP_013326.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:570734-571957:- | gene-YLR225C_NCYC1407 | rna-NM_001182112.1_NCYC1407 | cds-NP_013326.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:575005-576228:- | gene-YLR225C_PE2H3 | rna-NM_001182112.1_PE2H3 | cds-NP_013326.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:574749-575972:- | gene-YLR225C_PE2H4 | rna-NM_001182112.1_PE2H4 | cds-NP_013326.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:587695-588918:- | gene-YLR225C_S288C | rna-NM_001182112.1_S288C | cds-NP_013326.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000013.1:87632-88855:+ | gene-YLR225C_SA1 | rna-NM_001182112.1_SA1 | cds-NP_013326.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:572774-573997:- | gene-YLR225C_ThermosaccDry | rna-NM_001182112.1_ThermosaccDry | cds-NP_013326.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:584119-585342:- | gene-YLR225C_VR1 | rna-NM_001182112.1_VR1 | cds-NP_013326.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000024.1:97061-98284:- | gene-YLR225C_ZTW1 | rna-NM_001182112.1_ZTW1 | cds-NP_013326.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:558925-560148:- | gene-YLR225C_Sparadoxus | rna-NM_001182112.1_Sparadoxus | cds-NP_013326.1_Sparadoxus | 90.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |