YLR162W (YLR162W)


Gene profile

Gene name: YLR162W
Reference locus (S288C): YLR162W
Gene biotype: protein_coding

Description: Uncharacterized protein; Protein of unknown function; overexpression confers resistance to the antimicrobial peptide MiAMP1 and causes growth arrest, apoptosis, and increased sensitivity to cobalt chloride

Top 10 interactors (score): YMR265C (0.848); YDR415C (0.848); YGR182C (0.78); YLR157W-E (0.752); YEL075W-A (0.748); YOR343C (0.748); IMA3 (0.746); YER053C-A (0.746); YOL166C (0.745); YJL218W (0.715); PAU3 (0.699); HPF1 (0.574); AAD15 (0.574); CSS1 (0.573); REE1 (0.569); TIP20 (0.568); RFC4 (0.567); ASP3-3 (0.497); IMA5 (0.485); IMA4 (0.481)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005306.1:443767-444072:+ gene-YLR162W_AKU4011 rna-NM_001182049.1_AKU4011 cds-NP_013263.1_AKU4011 62.5 77.8 Unannotated 1 1 0 False False True False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000177.1:963-1268:+ gene-YLR162W_BG1 rna-NM_001182049.1_BG1 cds-NP_013263.1_BG1 62.5 77.8 Unannotated 1 1 0 False False True False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005514.1:455244-455550:+ gene-YLR162W_Bruggeman rna-NM_001182049.1_Bruggeman cds-NP_013263.1_Bruggeman 61.0 75.9 Unannotated 1 1 0 False False True False False
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:483556-483912:+ gene-YLR162W_CAT1 rna-NM_001182049.1_CAT1 cds-NP_013263.1_CAT1 99.1 100.0 Verified 1 1 0 False False False True False
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:450394-450699:+ gene-YLR162W_CBS1585 rna-NM_001182049.1_CBS1585 cds-NP_013263.1_CBS1585 62.5 77.8 Unannotated 1 1 0 False False True False False
CBS436 GCA_001738355.1 Sake Asia CM005354.1:440541-440846:+ gene-YLR162W_CBS436 rna-NM_001182049.1_CBS436 cds-NP_013263.1_CBS436 63.7 78.4 Unannotated 1 1 0 False False False False True
CBS6412 GCA_001738345.1 Sake Asia CM005338.1:447796-448101:+ gene-YLR162W_CBS6412 rna-NM_001182049.1_CBS6412 cds-NP_013263.1_CBS6412 62.5 77.8 Unannotated 1 1 0 False False True False False
CBS6413 GCA_001738265.1 Sake Asia CM005322.1:450700-451005:+ gene-YLR162W_CBS6413 rna-NM_001182049.1_CBS6413 cds-NP_013263.1_CBS6413 62.5 77.8 Unannotated 1 1 0 False False True False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001533.1:474294-474650:+ gene-YLR162W_CENPK1137D rna-NM_001182049.1_CENPK1137D cds-NP_013263.1_CENPK1137D 96.3 100.0 Verified 1 1 0 False False False True False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005482.1:443249-443554:+ gene-YLR162W_EthanolRed rna-NM_001182049.1_EthanolRed cds-NP_013263.1_EthanolRed 62.5 77.8 Unannotated 1 1 0 False False True False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005546.1:433846-434151:+ gene-YLR162W_FaliES1 rna-NM_001182049.1_FaliES1 cds-NP_013263.1_FaliES1 62.5 77.8 Unannotated 1 1 0 False False True False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000372.1:631-936:- gene-YLR162W_JAY291 rna-NM_001182049.1_JAY291 cds-NP_013263.1_JAY291 62.5 77.8 Unannotated 1 1 0 False False True False False
MUCL30387 GCA_001738515.1 Bread Europe CM005418.1:446170-446476:+ gene-YLR162W_MUCL30387 rna-NM_001182049.1_MUCL30387 cds-NP_013263.1_MUCL30387 61.0 75.9 Unannotated 1 1 0 False False True False False
MUCL30388 GCA_001738495.1 Bread Europe MBVW01000184.1:29-335:- gene-YLR162W_MUCL30388 rna-NM_001182049.1_MUCL30388 cds-NP_013263.1_MUCL30388 61.1 75.6 Unannotated 1 1 0 False False True False False
MUCL39482 GCA_001738235.1 Sake Asia CM005290.1:442466-442771:+ gene-YLR162W_MUCL39482 rna-NM_001182049.1_MUCL39482 cds-NP_013263.1_MUCL39482 62.5 77.8 Unannotated 1 1 0 False False True False False
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:451732-452038:+ gene-YLR162W_MUCL42920 rna-NM_001182049.1_MUCL42920 cds-NP_013263.1_MUCL42920 61.0 75.9 Unannotated 1 1 0 False False True False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:489547-489903:+ gene-YLR162W_NCIM3186 rna-NM_001182049.1_NCIM3186 cds-NP_013263.1_NCIM3186 54.0 100.0 Verified 1 1 0 False False True False False
NCYC1407 GCA_001738225.1 Sake Asia CM005274.1:443815-444120:+ gene-YLR162W_NCYC1407 rna-NM_001182049.1_NCYC1407 cds-NP_013263.1_NCYC1407 62.5 77.8 Unannotated 1 1 0 False False True False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:476902-477208:+ gene-YLR162W_PE2H3 rna-NM_001182049.1_PE2H3 cds-NP_013263.1_PE2H3 62.4 77.8 Unannotated 1 1 0 False False True False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:476645-476952:+ gene-YLR162W_PE2H4 rna-NM_001182049.1_PE2H4 cds-NP_013263.1_PE2H4 62.2 77.8 Unannotated 1 1 0 False False True False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:489573-489929:+ gene-YLR162W_S288C rna-NM_001182049.1_S288C cds-NP_013263.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000185.1:614-919:- gene-YLR162W_SA1 rna-NM_001182049.1_SA1 cds-NP_013263.1_SA1 62.8 77.8 Unannotated 1 1 0 False False True False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005498.1:435560-435865:+ gene-YLR162W_ThermosaccDry rna-NM_001182049.1_ThermosaccDry cds-NP_013263.1_ThermosaccDry 62.5 77.8 Unannotated 1 1 0 False False True False False
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:485966-486322:+ gene-YLR162W_VR1 rna-NM_001182049.1_VR1 cds-NP_013263.1_VR1 99.1 100.0 Verified 1 1 0 False False False True False

Additional files