YLR157W-D (YLR157W-D)


Gene profile

Gene name: YLR157W-D
Reference locus (S288C): YLR157W-D
Gene biotype: protein_coding

Description: Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; YLR157W-D has a paralog, YLR161W, that arose from a segmental duplication

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
BG1 GCA_001932575.1 Bioethanol South America MSHP01000096.1:10608-10820:+ gene-YLR157W-D_BG1 rna-NM_001184608.1_BG1 cds-NP_878124.1_BG1 99.5 100.0 Mismatch 1 1 0 False False False True False
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:482979-483191:+ gene-YLR157W-D_CAT1 rna-NM_001184608.1_CAT1 cds-NP_878124.1_CAT1 99.5 100.0 Mismatch 1 1 0 False False False True False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000373.1:131-343:- gene-YLR157W-D_JAY291 rna-NM_001184608.1_JAY291 cds-NP_878124.1_JAY291 99.5 100.0 Mismatch 1 1 0 False False False True False
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:475493-475705:+ gene-YLR157W-D_PE2H3 rna-NM_001184608.1_PE2H3 cds-NP_878124.1_PE2H3 99.5 100.0 Mismatch 1 1 0 False False False True False
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:475236-475448:+ gene-YLR157W-D_PE2H4 rna-NM_001184608.1_PE2H4 cds-NP_878124.1_PE2H4 99.5 100.0 Mismatch 1 1 0 False False False True False
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:475764-475976:+ gene-YLR157W-D_S288C rna-NM_001184608.1_S288C cds-NP_878124.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000115.1:13167-13379:+ gene-YLR157W-D_SA1 rna-NM_001184608.1_SA1 cds-NP_878124.1_SA1 99.5 100.0 Mismatch 1 1 0 False False False True False
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:485389-485601:+ gene-YLR157W-D_VR1 rna-NM_001184608.1_VR1 cds-NP_878124.1_VR1 99.5 100.0 Mismatch 1 1 0 False False False True False

Additional files