YLR157C-A (YLR157C-A)

Gene profile

Gene name: YLR157C-A
Reference locus (S288C): YLR157C-A
Gene biotype: protein_coding

Description: Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
PE2H3 GCA_905220325.1 Bioethanol South America HG994141.1:642521-643839:- gene-YLR157C-A_PE2H3 rna-NM_001184405.1_PE2H3 cds-NP_058170.1_PE2H3 99.3 99.6 Mismatch 1 1 0 False False False True False
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:480279-481601:- gene-YLR157C-A_S288C rna-NM_001184405.1_S288C cds-NP_058170.1_S288C 100.0 100.0 Mismatch 1 1 1 True True False False False

Additional files