YLR156C-A (YLR156C-A)


Gene profile

Gene name: YLR156C-A
Reference locus (S288C): YLR156C-A
Gene biotype: protein_coding

Description: Putative protein of unknown function; identified by fungal homology comparisons and RT-PCR; partially overlaps RND5-3; YLR156C-A has a paralog, YLR159C-A, that arose from a segmental duplication

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:453344-453468:- gene-YLR156C-A_CAT1 rna-NM_001184563.1_CAT1 cds-NP_878123.1_CAT1 83.4 89.3 Mismatch 1 1 0 False False True False False
FaliES1 GCA_001738715.1 Bioethanol Asia MBWD01000069.1:256-380:+ gene-YLR156C-A_FaliES1 rna-NM_001184563.1_FaliES1 cds-NP_878123.1_FaliES1 83.4 89.3 Mismatch 1 1 0 False False True False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:456771-456895:- gene-YLR156C-A_PE2H3 rna-NM_001184563.1_PE2H3 cds-NP_878123.1_PE2H3 83.4 89.3 Mismatch 1 1 0 False False True False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:456512-456636:- gene-YLR156C-A_PE2H4 rna-NM_001184563.1_PE2H4 cds-NP_878123.1_PE2H4 83.4 89.3 Mismatch 1 1 0 False False True False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:472479-472610:- gene-YLR156C-A_S288C rna-NM_001184563.1_S288C cds-NP_878123.1_S288C 100.0 100.0 Mismatch 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000115.1:13533-13603:- gene-YLR156C-A_SA1 rna-NM_001184563.1_SA1 cds-NP_878123.1_SA1 53.7 53.7 Mismatch 1 1 0 False False True False False

Additional files