YLR146W-A (YLR146W-A)


Gene profile

Gene name: YLR146W-A
Reference locus (S288C): YLR146W-A
Gene biotype: protein_coding

Description: Coiled-coil domain-containing protein YLR146W-A; Putative protein of unknown function

Top 10 interactors (score): SMD3 (0.732); YPR071W (0.697); DAD4 (0.589); ABM1 (0.566); ENV11 (0.525); PAU17 (0.522); YGL039W (0.487); DIA3 (0.485); ECM23 (0.48); IRC10 (0.454); BSC4 (0.454); PAU2 (0.452); RSF1 (0.45); MLP2 (0.404)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005306.1:416352-416540:+ gene-YLR146W-A_AKU4011 rna-NM_001184685.1_AKU4011 cds-NP_001032582.1_AKU4011 99.4 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000212.1:380121-380309:+ gene-YLR146W-A_BG1 rna-NM_001184685.1_BG1 cds-NP_001032582.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005514.1:428248-428436:+ gene-YLR146W-A_Bruggeman rna-NM_001184685.1_Bruggeman cds-NP_001032582.1_Bruggeman 99.4 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:427631-427819:+ gene-YLR146W-A_CAT1 rna-NM_001184685.1_CAT1 cds-NP_001032582.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:423495-423683:+ gene-YLR146W-A_CBS1585 rna-NM_001184685.1_CBS1585 cds-NP_001032582.1_CBS1585 99.4 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005354.1:413730-413918:+ gene-YLR146W-A_CBS436 rna-NM_001184685.1_CBS436 cds-NP_001032582.1_CBS436 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005338.1:421913-422101:+ gene-YLR146W-A_CBS6412 rna-NM_001184685.1_CBS6412 cds-NP_001032582.1_CBS6412 99.4 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005322.1:423760-423948:+ gene-YLR146W-A_CBS6413 rna-NM_001184685.1_CBS6413 cds-NP_001032582.1_CBS6413 99.4 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001533.1:418888-419076:+ gene-YLR146W-A_CENPK1137D rna-NM_001184685.1_CENPK1137D cds-NP_001032582.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005482.1:416553-416741:+ gene-YLR146W-A_EthanolRed rna-NM_001184685.1_EthanolRed cds-NP_001032582.1_EthanolRed 98.9 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005546.1:416064-416252:+ gene-YLR146W-A_FaliES1 rna-NM_001184685.1_FaliES1 cds-NP_001032582.1_FaliES1 98.9 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000061.1:22722-22910:+ gene-YLR146W-A_JAY291 rna-NM_001184685.1_JAY291 cds-NP_001032582.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005418.1:428253-428441:+ gene-YLR146W-A_MUCL30387 rna-NM_001184685.1_MUCL30387 cds-NP_001032582.1_MUCL30387 99.4 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005450.1:433053-433241:+ gene-YLR146W-A_MUCL30388 rna-NM_001184685.1_MUCL30388 cds-NP_001032582.1_MUCL30388 99.4 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005290.1:424004-424192:+ gene-YLR146W-A_MUCL39482 rna-NM_001184685.1_MUCL39482 cds-NP_001032582.1_MUCL39482 99.4 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:424158-424346:+ gene-YLR146W-A_MUCL42920 rna-NM_001184685.1_MUCL42920 cds-NP_001032582.1_MUCL42920 99.4 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:433844-434032:+ gene-YLR146W-A_NCIM3186 rna-NM_001184685.1_NCIM3186 cds-NP_001032582.1_NCIM3186 98.9 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005274.1:416276-416464:+ gene-YLR146W-A_NCYC1407 rna-NM_001184685.1_NCYC1407 cds-NP_001032582.1_NCYC1407 99.4 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:421831-422019:+ gene-YLR146W-A_PE2H3 rna-NM_001184685.1_PE2H3 cds-NP_001032582.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:421572-421760:+ gene-YLR146W-A_PE2H4 rna-NM_001184685.1_PE2H4 cds-NP_001032582.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:433870-434058:+ gene-YLR146W-A_S288C rna-NM_001184685.1_S288C cds-NP_001032582.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000055.1:59767-59955:+ gene-YLR146W-A_SA1 rna-NM_001184685.1_SA1 cds-NP_001032582.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005498.1:417274-417462:+ gene-YLR146W-A_ThermosaccDry rna-NM_001184685.1_ThermosaccDry cds-NP_001032582.1_ThermosaccDry 98.9 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:429972-430160:+ gene-YLR146W-A_VR1 rna-NM_001184685.1_VR1 cds-NP_001032582.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000023.1:415060-415248:+ gene-YLR146W-A_ZTW1 rna-NM_001184685.1_ZTW1 cds-NP_001032582.1_ZTW1 99.4 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047498.1:425207-425395:+ gene-YLR146W-A_Sparadoxus rna-NM_001184685.1_Sparadoxus cds-NP_001032582.1_Sparadoxus 92.5 100.0 Verified 1 1 1 False True False False False

Additional files