Gene name: YLR053C
Reference locus (S288C): YLR053C
Gene biotype: protein_coding
Description: Putative uncharacterized protein ylr053c; Putative protein of unknown function
Top 10 interactors (score): YGL182C (0.746); YLR462W (0.711); MNC1 (0.71); MRPL19 (0.705); SPO19 (0.7); YLL053C (0.699); YPL067C (0.698); CIN10 (0.675); YHL044W (0.658); IES3 (0.625); YFH7 (0.62); YNR064C (0.612); YLR179C (0.595); PAN2 (0.574); FSH1 (0.574); BMT5 (0.57); CWC24 (0.563); FMC1 (0.525); AGP3 (0.499); MSY1 (0.454)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:230583-230909:- | gene-YLR053C_AKU4011 | rna-NM_001181940.1_AKU4011 | cds-NP_013154.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:193717-194043:- | gene-YLR053C_BG1 | rna-NM_001181940.1_BG1 | cds-NP_013154.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:240491-240817:- | gene-YLR053C_Bruggeman | rna-NM_001181940.1_Bruggeman | cds-NP_013154.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:240812-241138:- | gene-YLR053C_CAT1 | rna-NM_001181940.1_CAT1 | cds-NP_013154.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:237719-238045:- | gene-YLR053C_CBS1585 | rna-NM_001181940.1_CBS1585 | cds-NP_013154.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:228344-228670:- | gene-YLR053C_CBS436 | rna-NM_001181940.1_CBS436 | cds-NP_013154.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:236130-236456:- | gene-YLR053C_CBS6412 | rna-NM_001181940.1_CBS6412 | cds-NP_013154.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:237984-238310:- | gene-YLR053C_CBS6413 | rna-NM_001181940.1_CBS6413 | cds-NP_013154.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:227378-227704:- | gene-YLR053C_CENPK1137D | rna-NM_001181940.1_CENPK1137D | cds-NP_013154.1_CENPK1137D | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:230098-230424:- | gene-YLR053C_EthanolRed | rna-NM_001181940.1_EthanolRed | cds-NP_013154.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:229986-230312:- | gene-YLR053C_FaliES1 | rna-NM_001181940.1_FaliES1 | cds-NP_013154.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000129.1:4916-5242:- | gene-YLR053C_JAY291 | rna-NM_001181940.1_JAY291 | cds-NP_013154.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:237844-238170:- | gene-YLR053C_MUCL30387 | rna-NM_001181940.1_MUCL30387 | cds-NP_013154.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:245507-245833:- | gene-YLR053C_MUCL30388 | rna-NM_001181940.1_MUCL30388 | cds-NP_013154.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:238214-238540:- | gene-YLR053C_MUCL39482 | rna-NM_001181940.1_MUCL39482 | cds-NP_013154.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:238120-238446:- | gene-YLR053C_MUCL42920 | rna-NM_001181940.1_MUCL42920 | cds-NP_013154.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:248074-248400:- | gene-YLR053C_NCIM3186 | rna-NM_001181940.1_NCIM3186 | cds-NP_013154.1_NCIM3186 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:230275-230601:- | gene-YLR053C_NCYC1407 | rna-NM_001181940.1_NCYC1407 | cds-NP_013154.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:236142-236468:- | gene-YLR053C_PE2H3 | rna-NM_001181940.1_PE2H3 | cds-NP_013154.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:235883-236209:- | gene-YLR053C_PE2H4 | rna-NM_001181940.1_PE2H4 | cds-NP_013154.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:248100-248426:- | gene-YLR053C_S288C | rna-NM_001181940.1_S288C | cds-NP_013154.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000046.1:73975-74301:- | gene-YLR053C_SA1 | rna-NM_001181940.1_SA1 | cds-NP_013154.1_SA1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:230171-230497:- | gene-YLR053C_ThermosaccDry | rna-NM_001181940.1_ThermosaccDry | cds-NP_013154.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:243836-244162:- | gene-YLR053C_VR1 | rna-NM_001181940.1_VR1 | cds-NP_013154.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:229531-229857:- | gene-YLR053C_ZTW1 | rna-NM_001181940.1_ZTW1 | cds-NP_013154.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |