YLR031W (YLR031W)


Gene profile

Gene name: YLR031W
Reference locus (S288C): YLR031W
Gene biotype: protein_coding

Description: Putative protein of unknown function; S288C contains an in-frame stop codon between ORFs YLR030W and YLR031W; YLR031W has a paralog, YMR124W, that arose from the whole genome duplication

Top 10 interactors (score): SCS22 (0.749); BEM3 (0.67); PEA2 (0.635); SCS2 (0.613); YLR030W (0.562); EPO1 (0.56); TCB2 (0.45)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005306.1:192156-192716:+ gene-YLR031W_AKU4011 rna-NM_001181918.1_AKU4011 cds-NP_013131.1_AKU4011 99.8 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000212.1:155431-155991:+ gene-YLR031W_BG1 rna-NM_001181918.1_BG1 cds-NP_013131.1_BG1 99.8 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005514.1:202548-203108:+ gene-YLR031W_Bruggeman rna-NM_001181918.1_Bruggeman cds-NP_013131.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:202876-203436:+ gene-YLR031W_CAT1 rna-NM_001181918.1_CAT1 cds-NP_013131.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:199782-200342:+ gene-YLR031W_CBS1585 rna-NM_001181918.1_CBS1585 cds-NP_013131.1_CBS1585 99.6 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005354.1:190416-190976:+ gene-YLR031W_CBS436 rna-NM_001181918.1_CBS436 cds-NP_013131.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005338.1:198191-198751:+ gene-YLR031W_CBS6412 rna-NM_001181918.1_CBS6412 cds-NP_013131.1_CBS6412 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005322.1:200044-200604:+ gene-YLR031W_CBS6413 rna-NM_001181918.1_CBS6413 cds-NP_013131.1_CBS6413 99.8 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001533.1:189458-190018:+ gene-YLR031W_CENPK1137D rna-NM_001181918.1_CENPK1137D cds-NP_013131.1_CENPK1137D 99.2 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005482.1:192167-192727:+ gene-YLR031W_EthanolRed rna-NM_001181918.1_EthanolRed cds-NP_013131.1_EthanolRed 99.6 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005546.1:192077-192637:+ gene-YLR031W_FaliES1 rna-NM_001181918.1_FaliES1 cds-NP_013131.1_FaliES1 99.6 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000431.1:35931-36491:+ gene-YLR031W_JAY291 rna-NM_001181918.1_JAY291 cds-NP_013131.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005418.1:199902-200462:+ gene-YLR031W_MUCL30387 rna-NM_001181918.1_MUCL30387 cds-NP_013131.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005450.1:206525-207077:+ gene-YLR031W_MUCL30388 rna-NM_001181918.1_MUCL30388 cds-NP_013131.1_MUCL30388 92.4 96.9 Verified 1 1 0 False False False True False
MUCL39482 GCA_001738235.1 Sake Asia CM005290.1:200277-200837:+ gene-YLR031W_MUCL39482 rna-NM_001181918.1_MUCL39482 cds-NP_013131.1_MUCL39482 99.6 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:200179-200739:+ gene-YLR031W_MUCL42920 rna-NM_001181918.1_MUCL42920 cds-NP_013131.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:204199-204759:+ gene-YLR031W_NCIM3186 rna-NM_001181918.1_NCIM3186 cds-NP_013131.1_NCIM3186 99.6 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005274.1:192335-192895:+ gene-YLR031W_NCYC1407 rna-NM_001181918.1_NCYC1407 cds-NP_013131.1_NCYC1407 99.8 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:198214-198774:+ gene-YLR031W_PE2H3 rna-NM_001181918.1_PE2H3 cds-NP_013131.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:197955-198515:+ gene-YLR031W_PE2H4 rna-NM_001181918.1_PE2H4 cds-NP_013131.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:204225-204785:+ gene-YLR031W_S288C rna-NM_001181918.1_S288C cds-NP_013131.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000046.1:36062-36622:+ gene-YLR031W_SA1 rna-NM_001181918.1_SA1 cds-NP_013131.1_SA1 99.2 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005498.1:192243-192803:+ gene-YLR031W_ThermosaccDry rna-NM_001181918.1_ThermosaccDry cds-NP_013131.1_ThermosaccDry 99.8 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:205664-206224:+ gene-YLR031W_VR1 rna-NM_001181918.1_VR1 cds-NP_013131.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000023.1:191607-192167:+ gene-YLR031W_ZTW1 rna-NM_001181918.1_ZTW1 cds-NP_013131.1_ZTW1 100.0 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047498.1:200397-200957:+ gene-YLR031W_Sparadoxus rna-NM_001181918.1_Sparadoxus cds-NP_013131.1_Sparadoxus 86.8 100.0 Mismatch 1 1 0 False False True False False

Additional files