YLL058W (YLL058W)


Gene profile

Gene name: YLL058W
Reference locus (S288C): YLL058W
Gene biotype: protein_coding

Description: Putative protein of unknown function with similarity to Str2p; Str2p is a cystathionine gamma-synthase important in sulfur metabolism; YLL058W is not an essential gene

Top 10 interactors (score): STR3 (0.99); CYS4 (0.989); MET6 (0.956); MCY1 (0.95); CYS3 (0.942); SAH1 (0.938); MET2 (0.93); MET5 (0.923); IRC7 (0.921); SAM4 (0.92); MHT1 (0.915); MET17 (0.912); YML082W (0.911); BAT1 (0.911); BAT2 (0.911); STR2 (0.904); MET10 (0.904); YLL059C (0.896); TUM1 (0.882); THR1 (0.858)

Homologues (species, bitscore): CTH (Homo sapiens, 61.6); Cth (Mus musculus, 62.8); cth (Danio rerio, 53.5); Eip55E (Drosophila melanogaster, 58.2); cth-2 (Caenorhabditis elegans, 65.5); MTO1 (Arabidopsis thaliana, 56.2)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005306.1:10374-12101:+ gene-YLL058W_AKU4011 rna-NM_001181878.1_AKU4011 cds-NP_013042.1_AKU4011 99.5 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000093.1:3387-5114:- gene-YLL058W_BG1 rna-NM_001181878.1_BG1 cds-NP_013042.1_BG1 99.4 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005514.1:19487-21214:+ gene-YLL058W_Bruggeman rna-NM_001181878.1_Bruggeman cds-NP_013042.1_Bruggeman 99.1 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:21210-22937:+ gene-YLL058W_CAT1 rna-NM_001181878.1_CAT1 cds-NP_013042.1_CAT1 99.3 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:18272-19999:+ gene-YLL058W_CBS1585 rna-NM_001181878.1_CBS1585 cds-NP_013042.1_CBS1585 99.7 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005354.1:8653-10380:+ gene-YLL058W_CBS436 rna-NM_001181878.1_CBS436 cds-NP_013042.1_CBS436 98.8 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005338.1:18318-20045:+ gene-YLL058W_CBS6412 rna-NM_001181878.1_CBS6412 cds-NP_013042.1_CBS6412 99.8 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005322.1:18083-19810:+ gene-YLL058W_CBS6413 rna-NM_001181878.1_CBS6413 cds-NP_013042.1_CBS6413 99.7 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001533.1:8512-10239:+ gene-YLL058W_CENPK1137D rna-NM_001181878.1_CENPK1137D cds-NP_013042.1_CENPK1137D 98.8 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005482.1:11196-12923:+ gene-YLL058W_EthanolRed rna-NM_001181878.1_EthanolRed cds-NP_013042.1_EthanolRed 99.5 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005546.1:10285-12012:+ gene-YLL058W_FaliES1 rna-NM_001181878.1_FaliES1 cds-NP_013042.1_FaliES1 99.5 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000073.1:9775-11502:+ gene-YLL058W_JAY291 rna-NM_001181878.1_JAY291 cds-NP_013042.1_JAY291 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005418.1:18389-20116:+ gene-YLL058W_MUCL30387 rna-NM_001181878.1_MUCL30387 cds-NP_013042.1_MUCL30387 99.0 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005450.1:22145-23872:+ gene-YLL058W_MUCL30388 rna-NM_001181878.1_MUCL30388 cds-NP_013042.1_MUCL30388 99.5 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005290.1:18274-20001:+ gene-YLL058W_MUCL39482 rna-NM_001181878.1_MUCL39482 cds-NP_013042.1_MUCL39482 99.7 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:18694-20421:+ gene-YLL058W_MUCL42920 rna-NM_001181878.1_MUCL42920 cds-NP_013042.1_MUCL42920 98.9 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:23543-25270:+ gene-YLL058W_NCIM3186 rna-NM_001181878.1_NCIM3186 cds-NP_013042.1_NCIM3186 99.6 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005274.1:10115-11842:+ gene-YLL058W_NCYC1407 rna-NM_001181878.1_NCYC1407 cds-NP_013042.1_NCYC1407 99.8 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:17181-18908:+ gene-YLL058W_PE2H3 rna-NM_001181878.1_PE2H3 cds-NP_013042.1_PE2H3 99.5 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:16978-18705:+ gene-YLL058W_PE2H4 rna-NM_001181878.1_PE2H4 cds-NP_013042.1_PE2H4 99.5 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:23569-25296:+ gene-YLL058W_S288C rna-NM_001181878.1_S288C cds-NP_013042.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000047.1:16815-18542:+ gene-YLL058W_SA1 rna-NM_001181878.1_SA1 cds-NP_013042.1_SA1 99.8 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005498.1:10820-12547:+ gene-YLL058W_ThermosaccDry rna-NM_001181878.1_ThermosaccDry cds-NP_013042.1_ThermosaccDry 99.5 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:22879-24606:+ gene-YLL058W_VR1 rna-NM_001181878.1_VR1 cds-NP_013042.1_VR1 99.4 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000023.1:10481-12207:+ gene-YLL058W_ZTW1 rna-NM_001181878.1_ZTW1 cds-NP_013042.1_ZTW1 99.7 99.9 Unannotated 1 1 0 False False False True False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047498.1:19533-21260:+ gene-YLL058W_Sparadoxus rna-NM_001181878.1_Sparadoxus cds-NP_013042.1_Sparadoxus 86.3 99.7 Verified 1 1 1 False True False False False

Additional files