Gene name: YLL054C
Reference locus (S288C): YLL054C
Gene biotype: protein_coding
Description: Uncharacterized transcriptional regulatory protein YLL054C; Putative protein of unknown function with similarity to Pip2p; an oleate-specific transcriptional activator of peroxisome proliferation; YLL054C is not an essential gene
Top 10 interactors (score): TBS1 (0.91); YLL053C (0.813); IES1 (0.753); LDB18 (0.748); AAD14 (0.718); IES4 (0.717); AQY2 (0.712); YCT1 (0.711); FRE6 (0.711); YLR278C (0.693); ARP4 (0.693); FPR4 (0.651); ZRT2 (0.568); DAL5 (0.526); YKE4 (0.524); PUS5 (0.499); PUS6 (0.497)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:19815-22346:- | gene-YLL054C_AKU4011 | rna-NM_001181874.2_AKU4011 | cds-NP_013046.2_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000204.1:6069-8600:+ | gene-YLL054C_BG1 | rna-NM_001181874.2_BG1 | cds-NP_013046.2_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:29192-31723:- | gene-YLL054C_Bruggeman | rna-NM_001181874.2_Bruggeman | cds-NP_013046.2_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:30685-33216:- | gene-YLL054C_CAT1 | rna-NM_001181874.2_CAT1 | cds-NP_013046.2_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:27713-30244:- | gene-YLL054C_CBS1585 | rna-NM_001181874.2_CBS1585 | cds-NP_013046.2_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:17763-20294:- | gene-YLL054C_CBS436 | rna-NM_001181874.2_CBS436 | cds-NP_013046.2_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:27759-30290:- | gene-YLL054C_CBS6412 | rna-NM_001181874.2_CBS6412 | cds-NP_013046.2_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:27523-30054:- | gene-YLL054C_CBS6413 | rna-NM_001181874.2_CBS6413 | cds-NP_013046.2_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:17624-20155:- | gene-YLL054C_CENPK1137D | rna-NM_001181874.2_CENPK1137D | cds-NP_013046.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:20628-23159:- | gene-YLL054C_EthanolRed | rna-NM_001181874.2_EthanolRed | cds-NP_013046.2_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:19717-22248:- | gene-YLL054C_FaliES1 | rna-NM_001181874.2_FaliES1 | cds-NP_013046.2_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000073.1:18887-21418:- | gene-YLL054C_JAY291 | rna-NM_001181874.2_JAY291 | cds-NP_013046.2_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:27499-30031:- | gene-YLL054C_MUCL30387 | rna-NM_001181874.2_MUCL30387 | cds-NP_013046.2_MUCL30387 | 99.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:31503-34035:- | gene-YLL054C_MUCL30388 | rna-NM_001181874.2_MUCL30388 | cds-NP_013046.2_MUCL30388 | 99.9 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:27715-30246:- | gene-YLL054C_MUCL39482 | rna-NM_001181874.2_MUCL39482 | cds-NP_013046.2_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:28070-30601:- | gene-YLL054C_MUCL42920 | rna-NM_001181874.2_MUCL42920 | cds-NP_013046.2_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:32647-35178:- | gene-YLL054C_NCIM3186 | rna-NM_001181874.2_NCIM3186 | cds-NP_013046.2_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:19555-22086:- | gene-YLL054C_NCYC1407 | rna-NM_001181874.2_NCYC1407 | cds-NP_013046.2_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:26292-28823:- | gene-YLL054C_PE2H3 | rna-NM_001181874.2_PE2H3 | cds-NP_013046.2_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:26089-28620:- | gene-YLL054C_PE2H4 | rna-NM_001181874.2_PE2H4 | cds-NP_013046.2_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:32673-35204:- | gene-YLL054C_S288C | rna-NM_001181874.2_S288C | cds-NP_013046.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000047.1:25925-28456:- | gene-YLL054C_SA1 | rna-NM_001181874.2_SA1 | cds-NP_013046.2_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:20252-22783:- | gene-YLL054C_ThermosaccDry | rna-NM_001181874.2_ThermosaccDry | cds-NP_013046.2_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:32477-35008:- | gene-YLL054C_VR1 | rna-NM_001181874.2_VR1 | cds-NP_013046.2_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:19581-22113:- | gene-YLL054C_ZTW1 | rna-NM_001181874.2_ZTW1 | cds-NP_013046.2_ZTW1 | 99.5 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:27971-30501:- | gene-YLL054C_Sparadoxus | rna-NM_001181874.2_Sparadoxus | cds-NP_013046.2_Sparadoxus | 87.4 | 99.9 | Verified | 1 | 1 | 0 | False | False | False | True | False |