Gene name: YLH47
Reference locus (S288C): YPR125W
Gene biotype: protein_coding
Description: LETM1 domain-containing protein YLH47, mitochondrial; Mitochondrial inner membrane protein; exposed to the mitochondrial matrix; associates with mitochondrial ribosomes; NOT required for respiratory growth; homolog of human Letm1, a protein implicated in Wolf-Hirschhorn syndrome
Top 10 interactors (score): KHA1 (0.895); VNX1 (0.884); YDL183C (0.85); MBA1 (0.76); MRS2 (0.758); PHO89 (0.753); PUF3 (0.728); NHX1 (0.723); OXA1 (0.721); NHA1 (0.719); TOK1 (0.717); VMA1 (0.702); TRK1 (0.699); TOM22 (0.688); TIM44 (0.681); PCP1 (0.678); MRP49 (0.675); PMR1 (0.639); ATP6 (0.636); PMC1 (0.609)
Homologues (species, bitscore): LETM1 (Homo sapiens, 207.2); Letm1 (Mus musculus, 211.5); letm1 (Danio rerio, 209.1); letm1 (Xenopus tropicalis, 186.0); Letm1 (Drosophila melanogaster, 201.8); letm-1 (Caenorhabditis elegans, 179.5); LETM2 (Arabidopsis thaliana, 234.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:759645-761009:+ | gene-YPR125W_AKU4011 | rna-NM_001184222.1_AKU4011 | cds-NP_015450.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:136356-137720:- | gene-YPR125W_BG1 | rna-NM_001184222.1_BG1 | cds-NP_015450.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:840298-841662:+ | gene-YPR125W_Bruggeman | rna-NM_001184222.1_Bruggeman | cds-NP_015450.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:882223-883587:+ | gene-YPR125W_CAT1 | rna-NM_001184222.1_CAT1 | cds-NP_015450.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:763902-765266:+ | gene-YPR125W_CBS1585 | rna-NM_001184222.1_CBS1585 | cds-NP_015450.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:778377-779741:+ | gene-YPR125W_CBS436 | rna-NM_001184222.1_CBS436 | cds-NP_015450.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:766625-767989:+ | gene-YPR125W_CBS6412 | rna-NM_001184222.1_CBS6412 | cds-NP_015450.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:761348-762712:+ | gene-YPR125W_CBS6413 | rna-NM_001184222.1_CBS6413 | cds-NP_015450.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:787985-789349:+ | gene-YPR125W_CENPK1137D | rna-NM_001184222.1_CENPK1137D | cds-NP_015450.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:1081812-1083176:+ | gene-YPR125W_EthanolRed | rna-NM_001184222.1_EthanolRed | cds-NP_015450.1_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:761359-762723:+ | gene-YPR125W_FaliES1 | rna-NM_001184222.1_FaliES1 | cds-NP_015450.1_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000036.1:18636-20000:+ | gene-YPR125W_JAY291 | rna-NM_001184222.1_JAY291 | cds-NP_015450.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:780489-781853:+ | gene-YPR125W_MUCL30387 | rna-NM_001184222.1_MUCL30387 | cds-NP_015450.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:780455-781819:+ | gene-YPR125W_MUCL30388 | rna-NM_001184222.1_MUCL30388 | cds-NP_015450.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:756409-757773:+ | gene-YPR125W_MUCL39482 | rna-NM_001184222.1_MUCL39482 | cds-NP_015450.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:820209-821573:+ | gene-YPR125W_MUCL42920 | rna-NM_001184222.1_MUCL42920 | cds-NP_015450.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:787944-789308:+ | gene-YPR125W_NCIM3186 | rna-NM_001184222.1_NCIM3186 | cds-NP_015450.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:765002-766366:+ | gene-YPR125W_NCYC1407 | rna-NM_001184222.1_NCYC1407 | cds-NP_015450.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:771724-773088:+ | gene-YPR125W_PE2H3 | rna-NM_001184222.1_PE2H3 | cds-NP_015450.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:771372-772736:+ | gene-YPR125W_PE2H4 | rna-NM_001184222.1_PE2H4 | cds-NP_015450.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:787961-789325:+ | gene-YPR125W_S288C | rna-NM_001184222.1_S288C | cds-NP_015450.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000028.1:85757-87121:+ | gene-YPR125W_SA1 | rna-NM_001184222.1_SA1 | cds-NP_015450.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:760804-762168:+ | gene-YPR125W_ThermosaccDry | rna-NM_001184222.1_ThermosaccDry | cds-NP_015450.1_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:782630-783994:+ | gene-YPR125W_VR1 | rna-NM_001184222.1_VR1 | cds-NP_015450.1_VR1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:764559-765923:+ | gene-YPR125W_ZTW1 | rna-NM_001184222.1_ZTW1 | cds-NP_015450.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:766508-767872:+ | gene-YPR125W_Sparadoxus | rna-NM_001184222.1_Sparadoxus | cds-NP_015450.1_Sparadoxus | 89.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |