YKR070W (YKR070W)


Gene profile

Gene name: YKR070W
Reference locus (S288C): YKR070W
Gene biotype: protein_coding

Description: Uncharacterized protein YKR070W; Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies

Top 10 interactors (score): NCA2 (0.933); AIM19 (0.904); ACO2 (0.881); NAM2 (0.831); COX15 (0.82); RSM22 (0.806); CRD1 (0.802); OXA1 (0.784); HMI1 (0.76); KGD1 (0.684); GIS2 (0.67); ARG2 (0.648); DJP1 (0.537); EKI1 (0.53); CKI1 (0.53); ISY1 (0.49); MDM34 (0.485); ATP11 (0.482); RPL39 (0.481); YAH1 (0.479)

Homologues (species, bitscore): CECR5 (Homo sapiens, 125.6); Cecr5 (Mus musculus, 124.4); CECR5 (Danio rerio, 132.5); hdhd5 (Xenopus tropicalis, 137.5); H32C10.1 (Caenorhabditis elegans, 112.1); AT3G45740 (Arabidopsis thaliana, 173.7)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005305.1:559619-560677:+ gene-YKR070W_AKU4011 rna-NM_001179860.1_AKU4011 cds-NP_012996.1_AKU4011 100.0 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000113.1:83599-84657:- gene-YKR070W_BG1 rna-NM_001179860.1_BG1 cds-NP_012996.1_BG1 99.8 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005513.1:581058-582116:+ gene-YKR070W_Bruggeman rna-NM_001179860.1_Bruggeman cds-NP_012996.1_Bruggeman 99.9 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005529.1:577465-578523:+ gene-YKR070W_CAT1 rna-NM_001179860.1_CAT1 cds-NP_012996.1_CAT1 99.6 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005369.1:572112-573170:+ gene-YKR070W_CBS1585 rna-NM_001179860.1_CBS1585 cds-NP_012996.1_CBS1585 99.6 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005353.1:570441-571499:+ gene-YKR070W_CBS436 rna-NM_001179860.1_CBS436 cds-NP_012996.1_CBS436 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005337.1:555400-556458:+ gene-YKR070W_CBS6412 rna-NM_001179860.1_CBS6412 cds-NP_012996.1_CBS6412 99.9 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005321.1:571930-572988:+ gene-YKR070W_CBS6413 rna-NM_001179860.1_CBS6413 cds-NP_012996.1_CBS6413 100.0 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001532.1:573241-574299:+ gene-YKR070W_CENPK1137D rna-NM_001179860.1_CENPK1137D cds-NP_012996.1_CENPK1137D 99.8 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005481.1:568929-569987:+ gene-YKR070W_EthanolRed rna-NM_001179860.1_EthanolRed cds-NP_012996.1_EthanolRed 99.9 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005545.1:572829-573887:+ gene-YKR070W_FaliES1 rna-NM_001179860.1_FaliES1 cds-NP_012996.1_FaliES1 99.9 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000410.1:4351-5409:- gene-YKR070W_JAY291 rna-NM_001179860.1_JAY291 cds-NP_012996.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005417.1:581442-582500:+ gene-YKR070W_MUCL30387 rna-NM_001179860.1_MUCL30387 cds-NP_012996.1_MUCL30387 99.8 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005449.1:576042-577100:+ gene-YKR070W_MUCL30388 rna-NM_001179860.1_MUCL30388 cds-NP_012996.1_MUCL30388 99.8 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005289.1:570941-571999:+ gene-YKR070W_MUCL39482 rna-NM_001179860.1_MUCL39482 cds-NP_012996.1_MUCL39482 99.6 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005433.1:576965-578023:+ gene-YKR070W_MUCL42920 rna-NM_001179860.1_MUCL42920 cds-NP_012996.1_MUCL42920 99.8 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011820.1:573563-574621:+ gene-YKR070W_NCIM3186 rna-NM_001179860.1_NCIM3186 cds-NP_012996.1_NCIM3186 99.5 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005273.1:571362-572420:+ gene-YKR070W_NCYC1407 rna-NM_001179860.1_NCYC1407 cds-NP_012996.1_NCYC1407 100.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994150.1:596518-597576:+ gene-YKR070W_PE2H3 rna-NM_001179860.1_PE2H3 cds-NP_012996.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999882.1:580903-581961:+ gene-YKR070W_PE2H4 rna-NM_001179860.1_PE2H4 cds-NP_012996.1_PE2H4 99.8 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001143.9:573574-574632:+ gene-YKR070W_S288C rna-NM_001179860.1_S288C cds-NP_012996.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000029.1:107212-108270:- gene-YKR070W_SA1 rna-NM_001179860.1_SA1 cds-NP_012996.1_SA1 99.7 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005497.1:572068-573126:+ gene-YKR070W_ThermosaccDry rna-NM_001179860.1_ThermosaccDry cds-NP_012996.1_ThermosaccDry 99.9 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005465.1:571828-572886:+ gene-YKR070W_VR1 rna-NM_001179860.1_VR1 cds-NP_012996.1_VR1 99.7 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000022.1:569556-570614:+ gene-YKR070W_ZTW1 rna-NM_001179860.1_ZTW1 cds-NP_012996.1_ZTW1 100.0 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047497.1:594949-596007:+ gene-YKR070W_Sparadoxus rna-NM_001179860.1_Sparadoxus cds-NP_012996.1_Sparadoxus 90.1 100.0 Verified 1 1 1 False True False False False

Additional files