Gene name: YKR011C
Reference locus (S288C): YKR011C
Gene biotype: protein_coding
Description: Uncharacterized protein YKR011C; Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; protein abundance increases in response to DNA replication stress
Top 10 interactors (score): YOR343C (0.748); YDR222W (0.705); YPR003C (0.705); LCL1 (0.671); SET3 (0.651); SET4 (0.597); SDD4 (0.581); SET5 (0.569); SET6 (0.568); OSH6 (0.541); KAR5 (0.514); CLN1 (0.497); HOS1 (0.497); HAT2 (0.497); SEC53 (0.485); HAT1 (0.483); HO (0.454); PHO5 (0.45); PCL9 (0.45); HSP42 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:447298-448359:- | gene-YKR011C_AKU4011 | rna-NM_001179801.1_AKU4011 | cds-NP_012936.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:195215-196276:+ | gene-YKR011C_BG1 | rna-NM_001179801.1_BG1 | cds-NP_012936.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:468999-470060:- | gene-YKR011C_Bruggeman | rna-NM_001179801.1_Bruggeman | cds-NP_012936.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:464690-465751:- | gene-YKR011C_CAT1 | rna-NM_001179801.1_CAT1 | cds-NP_012936.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:460038-461099:- | gene-YKR011C_CBS1585 | rna-NM_001179801.1_CBS1585 | cds-NP_012936.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:458873-459934:- | gene-YKR011C_CBS436 | rna-NM_001179801.1_CBS436 | cds-NP_012936.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:444196-445257:- | gene-YKR011C_CBS6412 | rna-NM_001179801.1_CBS6412 | cds-NP_012936.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:459870-460931:- | gene-YKR011C_CBS6413 | rna-NM_001179801.1_CBS6413 | cds-NP_012936.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:461306-462367:- | gene-YKR011C_CENPK1137D | rna-NM_001179801.1_CENPK1137D | cds-NP_012936.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:457767-458828:- | gene-YKR011C_EthanolRed | rna-NM_001179801.1_EthanolRed | cds-NP_012936.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:460700-461761:- | gene-YKR011C_FaliES1 | rna-NM_001179801.1_FaliES1 | cds-NP_012936.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000077.1:91984-93045:+ | gene-YKR011C_JAY291 | rna-NM_001179801.1_JAY291 | cds-NP_012936.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:468313-469374:- | gene-YKR011C_MUCL30387 | rna-NM_001179801.1_MUCL30387 | cds-NP_012936.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:463924-464985:- | gene-YKR011C_MUCL30388 | rna-NM_001179801.1_MUCL30388 | cds-NP_012936.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:459355-460416:- | gene-YKR011C_MUCL39482 | rna-NM_001179801.1_MUCL39482 | cds-NP_012936.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:465160-466221:- | gene-YKR011C_MUCL42920 | rna-NM_001179801.1_MUCL42920 | cds-NP_012936.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:461624-462685:- | gene-YKR011C_NCIM3186 | rna-NM_001179801.1_NCIM3186 | cds-NP_012936.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:459563-460624:- | gene-YKR011C_NCYC1407 | rna-NM_001179801.1_NCYC1407 | cds-NP_012936.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:484548-485609:- | gene-YKR011C_PE2H3 | rna-NM_001179801.1_PE2H3 | cds-NP_012936.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:469290-470351:- | gene-YKR011C_PE2H4 | rna-NM_001179801.1_PE2H4 | cds-NP_012936.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:461635-462696:- | gene-YKR011C_S288C | rna-NM_001179801.1_S288C | cds-NP_012936.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000078.1:51088-52149:+ | gene-YKR011C_SA1 | rna-NM_001179801.1_SA1 | cds-NP_012936.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:459954-461015:- | gene-YKR011C_ThermosaccDry | rna-NM_001179801.1_ThermosaccDry | cds-NP_012936.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:459571-460632:- | gene-YKR011C_VR1 | rna-NM_001179801.1_VR1 | cds-NP_012936.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:458003-459064:- | gene-YKR011C_ZTW1 | rna-NM_001179801.1_ZTW1 | cds-NP_012936.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:483473-484534:- | gene-YKR011C_Sparadoxus | rna-NM_001179801.1_Sparadoxus | cds-NP_012936.1_Sparadoxus | 90.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |