Gene name: YKL107W
Reference locus (S288C): YKL107W
Gene biotype: protein_coding
Description: Uncharacterized oxidoreductase YKL107W; Putative short-chain dehydrogenase/reductase; proposed to be a palmitoylated membrane protein
Top 10 interactors (score): YDL114W (0.832); YPL119C-A (0.782); SHH3 (0.774); YGR153W (0.76); YJL045W (0.756); ECM8 (0.744); PAI3 (0.737); SDD1 (0.713); AAT1 (0.713); CDA1 (0.704); CRR1 (0.694); HXT5 (0.679); HEF3 (0.673); NDE2 (0.665); CDA2 (0.66); GRE1 (0.639); YBR116C (0.628); PHM6 (0.613); MAM1 (0.612); YMR090W (0.536)
Homologues (species, bitscore): RDH14 (Homo sapiens, 50.1); Rdh14 (Mus musculus, 50.1); si:dkey-23o4.6 (Danio rerio, 56.6); rdh14 (Xenopus tropicalis, 65.9); CG30495 (Drosophila melanogaster, 50.1); AT4G11410 (Arabidopsis thaliana, 55.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:222693-223622:+ | gene-YKL107W_AKU4011 | rna-NM_001179673.1_AKU4011 | cds-NP_012815.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:199820-200749:+ | gene-YKL107W_BG1 | rna-NM_001179673.1_BG1 | cds-NP_012815.1_BG1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:240868-241797:+ | gene-YKL107W_Bruggeman | rna-NM_001179673.1_Bruggeman | cds-NP_012815.1_Bruggeman | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:235667-236596:+ | gene-YKL107W_CAT1 | rna-NM_001179673.1_CAT1 | cds-NP_012815.1_CAT1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:234932-235861:+ | gene-YKL107W_CBS1585 | rna-NM_001179673.1_CBS1585 | cds-NP_012815.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:233533-234462:+ | gene-YKL107W_CBS436 | rna-NM_001179673.1_CBS436 | cds-NP_012815.1_CBS436 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:219564-220493:+ | gene-YKL107W_CBS6412 | rna-NM_001179673.1_CBS6412 | cds-NP_012815.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:235389-236318:+ | gene-YKL107W_CBS6413 | rna-NM_001179673.1_CBS6413 | cds-NP_012815.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:235782-236711:+ | gene-YKL107W_CENPK1137D | rna-NM_001179673.1_CENPK1137D | cds-NP_012815.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:233384-234313:+ | gene-YKL107W_EthanolRed | rna-NM_001179673.1_EthanolRed | cds-NP_012815.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:234197-235126:+ | gene-YKL107W_FaliES1 | rna-NM_001179673.1_FaliES1 | cds-NP_012815.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000357.1:56535-57464:+ | gene-YKL107W_JAY291 | rna-NM_001179673.1_JAY291 | cds-NP_012815.1_JAY291 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:242673-243602:+ | gene-YKL107W_MUCL30387 | rna-NM_001179673.1_MUCL30387 | cds-NP_012815.1_MUCL30387 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:237072-238001:+ | gene-YKL107W_MUCL30388 | rna-NM_001179673.1_MUCL30388 | cds-NP_012815.1_MUCL30388 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:234720-235649:+ | gene-YKL107W_MUCL39482 | rna-NM_001179673.1_MUCL39482 | cds-NP_012815.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:239115-240044:+ | gene-YKL107W_MUCL42920 | rna-NM_001179673.1_MUCL42920 | cds-NP_012815.1_MUCL42920 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:236130-237059:+ | gene-YKL107W_NCIM3186 | rna-NM_001179673.1_NCIM3186 | cds-NP_012815.1_NCIM3186 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:234911-235840:+ | gene-YKL107W_NCYC1407 | rna-NM_001179673.1_NCYC1407 | cds-NP_012815.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:242008-242937:+ | gene-YKL107W_PE2H3 | rna-NM_001179673.1_PE2H3 | cds-NP_012815.1_PE2H3 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:238295-239224:+ | gene-YKL107W_PE2H4 | rna-NM_001179673.1_PE2H4 | cds-NP_012815.1_PE2H4 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:236141-237070:+ | gene-YKL107W_S288C | rna-NM_001179673.1_S288C | cds-NP_012815.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000008.1:152256-153185:+ | gene-YKL107W_SA1 | rna-NM_001179673.1_SA1 | cds-NP_012815.1_SA1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:234897-235826:+ | gene-YKL107W_ThermosaccDry | rna-NM_001179673.1_ThermosaccDry | cds-NP_012815.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:234268-235197:+ | gene-YKL107W_VR1 | rna-NM_001179673.1_VR1 | cds-NP_012815.1_VR1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:233454-234383:+ | gene-YKL107W_ZTW1 | rna-NM_001179673.1_ZTW1 | cds-NP_012815.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:250467-251396:+ | gene-YKL107W_Sparadoxus | rna-NM_001179673.1_Sparadoxus | cds-NP_012815.1_Sparadoxus | 88.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |