Gene name: YKE4
Reference locus (S288C): YIL023C
Gene biotype: protein_coding
Description: Solute carrier family 39 (zinc transporter), member 7; Zinc transporter; localizes to the ER; null mutant is sensitive to calcofluor white, leads to zinc accumulation in cytosol; ortholog of the mouse KE4 and member of the ZIP (ZRT, IRT-like Protein) family
Top 10 interactors (score): MSC2 (0.988); ZRT2 (0.986); ZRT3 (0.986); ZRT1 (0.983); ZRC1 (0.977); ATX2 (0.959); COT1 (0.957); ZRG17 (0.916); ZAP1 (0.913); MMT1 (0.848); YPF1 (0.827); SPO22 (0.761); FET4 (0.724); ZPS1 (0.717); CSR1 (0.713); MMT2 (0.705); CCC1 (0.684); SMF1 (0.664); ERV41 (0.661); CCC2 (0.65)
Homologues (species, bitscore): SLC39A7 (Homo sapiens, 148.7); Slc39a7 (Mus musculus, 151.8); slc39a7 (Danio rerio, 146.7); slc39a7 (Xenopus tropicalis, 146.4); Catsup (Drosophila melanogaster, 136.7); hke-4.2 (Caenorhabditis elegans, 181.4); IAR1 (Arabidopsis thaliana, 80.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:307843-308883:- | gene-YIL023C_AKU4011 | rna-NM_001179373.1_AKU4011 | cds-NP_012241.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000164.1:167666-168706:- | gene-YIL023C_BG1 | rna-NM_001179373.1_BG1 | cds-NP_012241.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:312983-314023:- | gene-YIL023C_Bruggeman | rna-NM_001179373.1_Bruggeman | cds-NP_012241.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:300400-301440:- | gene-YIL023C_CAT1 | rna-NM_001179373.1_CAT1 | cds-NP_012241.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:307932-308972:- | gene-YIL023C_CBS1585 | rna-NM_001179373.1_CBS1585 | cds-NP_012241.1_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:301364-302404:- | gene-YIL023C_CBS436 | rna-NM_001179373.1_CBS436 | cds-NP_012241.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:303464-304504:- | gene-YIL023C_CBS6412 | rna-NM_001179373.1_CBS6412 | cds-NP_012241.1_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:299848-300888:- | gene-YIL023C_CBS6413 | rna-NM_001179373.1_CBS6413 | cds-NP_012241.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:301295-302335:- | gene-YIL023C_CENPK1137D | rna-NM_001179373.1_CENPK1137D | cds-NP_012241.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:290810-291850:- | gene-YIL023C_EthanolRed | rna-NM_001179373.1_EthanolRed | cds-NP_012241.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:308721-309761:- | gene-YIL023C_FaliES1 | rna-NM_001179373.1_FaliES1 | cds-NP_012241.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000098.1:7229-8269:+ | gene-YIL023C_JAY291 | rna-NM_001179373.1_JAY291 | cds-NP_012241.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:309833-310873:- | gene-YIL023C_MUCL30387 | rna-NM_001179373.1_MUCL30387 | cds-NP_012241.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:305938-306978:- | gene-YIL023C_MUCL30388 | rna-NM_001179373.1_MUCL30388 | cds-NP_012241.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:308523-309563:- | gene-YIL023C_MUCL39482 | rna-NM_001179373.1_MUCL39482 | cds-NP_012241.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:311651-312691:- | gene-YIL023C_MUCL42920 | rna-NM_001179373.1_MUCL42920 | cds-NP_012241.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:309386-310426:- | gene-YIL023C_NCIM3186 | rna-NM_001179373.1_NCIM3186 | cds-NP_012241.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:312796-313836:- | gene-YIL023C_NCYC1407 | rna-NM_001179373.1_NCYC1407 | cds-NP_012241.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:304435-305475:- | gene-YIL023C_PE2H3 | rna-NM_001179373.1_PE2H3 | cds-NP_012241.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:299141-300181:- | gene-YIL023C_PE2H4 | rna-NM_001179373.1_PE2H4 | cds-NP_012241.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:309386-310426:- | gene-YIL023C_S288C | rna-NM_001179373.1_S288C | cds-NP_012241.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000031.1:14108-15148:+ | gene-YIL023C_SA1 | rna-NM_001179373.1_SA1 | cds-NP_012241.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:307390-308430:- | gene-YIL023C_ThermosaccDry | rna-NM_001179373.1_ThermosaccDry | cds-NP_012241.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:304023-305063:- | gene-YIL023C_VR1 | rna-NM_001179373.1_VR1 | cds-NP_012241.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:281810-282850:- | gene-YIL023C_ZTW1 | rna-NM_001179373.1_ZTW1 | cds-NP_012241.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:302530-303573:- | gene-YIL023C_Sparadoxus | rna-NM_001179373.1_Sparadoxus | cds-NP_012241.1_Sparadoxus | 86.6 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |