Gene name: YJU2
Reference locus (S288C): YKL095W
Gene biotype: protein_coding
Description: Mrna splicing protein yju2; Essential protein required for pre-mRNA splicing; associates transiently with the spliceosomal NTC ("nineteen complex") and acts after Prp2p to promote the first catalytic reaction of splicing
Top 10 interactors (score): CWC25 (0.999); PRP19 (0.999); SYF2 (0.999); CWC2 (0.999); CEF1 (0.999); CDC40 (0.999); SNT309 (0.999); CLF1 (0.999); CWC22 (0.999); PRP46 (0.999); PRP16 (0.999); SYF1 (0.999); ISY1 (0.999); PRP45 (0.999); CWC15 (0.997); SNU114 (0.996); BRR2 (0.995); SLU7 (0.995); PRP22 (0.995); ECM2 (0.994)
Homologues (species, bitscore): CCDC94 (Homo sapiens, 116.3); Ccdc94 (Mus musculus, 116.7); ccdc94 (Danio rerio, 118.2); ccdc94 (Xenopus tropicalis, 88.6); CG8435 (Drosophila melanogaster, 129.4); F37C12.1 (Caenorhabditis elegans, 98.2); AT1G17130 (Arabidopsis thaliana, 105.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:248835-249671:+ | gene-YKL095W_AKU4011 | rna-NM_001179661.1_AKU4011 | cds-NP_012828.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:225956-226792:+ | gene-YKL095W_BG1 | rna-NM_001179661.1_BG1 | cds-NP_012828.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:267008-267844:+ | gene-YKL095W_Bruggeman | rna-NM_001179661.1_Bruggeman | cds-NP_012828.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:261802-262638:+ | gene-YKL095W_CAT1 | rna-NM_001179661.1_CAT1 | cds-NP_012828.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:261077-261913:+ | gene-YKL095W_CBS1585 | rna-NM_001179661.1_CBS1585 | cds-NP_012828.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:259665-260501:+ | gene-YKL095W_CBS436 | rna-NM_001179661.1_CBS436 | cds-NP_012828.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:245705-246541:+ | gene-YKL095W_CBS6412 | rna-NM_001179661.1_CBS6412 | cds-NP_012828.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:261533-262369:+ | gene-YKL095W_CBS6413 | rna-NM_001179661.1_CBS6413 | cds-NP_012828.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:261918-262754:+ | gene-YKL095W_CENPK1137D | rna-NM_001179661.1_CENPK1137D | cds-NP_012828.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:259528-260364:+ | gene-YKL095W_EthanolRed | rna-NM_001179661.1_EthanolRed | cds-NP_012828.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:260341-261177:+ | gene-YKL095W_FaliES1 | rna-NM_001179661.1_FaliES1 | cds-NP_012828.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000357.1:82666-83502:+ | gene-YKL095W_JAY291 | rna-NM_001179661.1_JAY291 | cds-NP_012828.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:268807-269643:+ | gene-YKL095W_MUCL30387 | rna-NM_001179661.1_MUCL30387 | cds-NP_012828.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:263203-264039:+ | gene-YKL095W_MUCL30388 | rna-NM_001179661.1_MUCL30388 | cds-NP_012828.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:260862-261698:+ | gene-YKL095W_MUCL39482 | rna-NM_001179661.1_MUCL39482 | cds-NP_012828.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:265500-266336:+ | gene-YKL095W_MUCL42920 | rna-NM_001179661.1_MUCL42920 | cds-NP_012828.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:262266-263102:+ | gene-YKL095W_NCIM3186 | rna-NM_001179661.1_NCIM3186 | cds-NP_012828.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:261056-261892:+ | gene-YKL095W_NCYC1407 | rna-NM_001179661.1_NCYC1407 | cds-NP_012828.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:268141-268977:+ | gene-YKL095W_PE2H3 | rna-NM_001179661.1_PE2H3 | cds-NP_012828.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:264428-265264:+ | gene-YKL095W_PE2H4 | rna-NM_001179661.1_PE2H4 | cds-NP_012828.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:262277-263113:+ | gene-YKL095W_S288C | rna-NM_001179661.1_S288C | cds-NP_012828.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000008.1:178395-179231:+ | gene-YKL095W_SA1 | rna-NM_001179661.1_SA1 | cds-NP_012828.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:261046-261882:+ | gene-YKL095W_ThermosaccDry | rna-NM_001179661.1_ThermosaccDry | cds-NP_012828.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:260402-261238:+ | gene-YKL095W_VR1 | rna-NM_001179661.1_VR1 | cds-NP_012828.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:259607-260443:+ | gene-YKL095W_ZTW1 | rna-NM_001179661.1_ZTW1 | cds-NP_012828.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:276596-277432:+ | gene-YKL095W_Sparadoxus | rna-NM_001179661.1_Sparadoxus | cds-NP_012828.1_Sparadoxus | 88.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |