YJR154W (YJR154W)


Gene profile

Gene name: YJR154W
Reference locus (S288C): YJR154W
Gene biotype: protein_coding

Description: Uncharacterized protein YJR154W; Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; Belongs to the PhyH family

Top 10 interactors (score): AAD10 (0.957); POT1 (0.915); BIO3 (0.908); BIO5 (0.901); BIO4 (0.9); PEX7 (0.748); COA1 (0.692); MGS1 (0.687); PEX13 (0.675); YET3 (0.671); YCR102W-A (0.67); YER189W (0.67); PEX14 (0.657); MOG1 (0.65); PEX10 (0.634); PEX5 (0.633); PEX12 (0.624); AIM36 (0.619); TED1 (0.618); YBR298C-A (0.573)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005304.1:697694-698734:+ gene-YJR154W_AKU4011 rna-NM_001181812.1_AKU4011 cds-NP_012688.1_AKU4011 99.2 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000125.1:1487-2527:+ gene-YJR154W_BG1 rna-NM_001181812.1_BG1 cds-NP_012688.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:714408-715448:+ gene-YJR154W_Bruggeman rna-NM_001181812.1_Bruggeman cds-NP_012688.1_Bruggeman 99.8 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:717685-718725:+ gene-YJR154W_CAT1 rna-NM_001181812.1_CAT1 cds-NP_012688.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005352.1:728703-729743:+ gene-YJR154W_CBS436 rna-NM_001181812.1_CBS436 cds-NP_012688.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001531.1:708149-709189:+ gene-YJR154W_CENPK1137D rna-NM_001181812.1_CENPK1137D cds-NP_012688.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005480.1:700889-701929:+ gene-YJR154W_EthanolRed rna-NM_001181812.1_EthanolRed cds-NP_012688.1_EthanolRed 99.3 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:713630-714670:+ gene-YJR154W_FaliES1 rna-NM_001181812.1_FaliES1 cds-NP_012688.1_FaliES1 99.3 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000413.1:777-1817:- gene-YJR154W_JAY291 rna-NM_001181812.1_JAY291 cds-NP_012688.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005416.1:714531-715571:+ gene-YJR154W_MUCL30387 rna-NM_001181812.1_MUCL30387 cds-NP_012688.1_MUCL30387 99.8 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:711625-712665:+ gene-YJR154W_MUCL30388 rna-NM_001181812.1_MUCL30388 cds-NP_012688.1_MUCL30388 99.2 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005432.1:707604-708644:+ gene-YJR154W_MUCL42920 rna-NM_001181812.1_MUCL42920 cds-NP_012688.1_MUCL42920 99.1 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:725763-726803:+ gene-YJR154W_NCIM3186 rna-NM_001181812.1_NCIM3186 cds-NP_012688.1_NCIM3186 98.8 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:718745-719785:+ gene-YJR154W_PE2H3 rna-NM_001181812.1_PE2H3 cds-NP_012688.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999881.1:712434-713474:+ gene-YJR154W_PE2H4 rna-NM_001181812.1_PE2H4 cds-NP_012688.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:725784-726824:+ gene-YJR154W_S288C rna-NM_001181812.1_S288C cds-NP_012688.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000108.1:2046-3086:- gene-YJR154W_SA1 rna-NM_001181812.1_SA1 cds-NP_012688.1_SA1 99.9 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005496.1:707623-708663:+ gene-YJR154W_ThermosaccDry rna-NM_001181812.1_ThermosaccDry cds-NP_012688.1_ThermosaccDry 99.3 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005464.1:709451-710491:+ gene-YJR154W_VR1 rna-NM_001181812.1_VR1 cds-NP_012688.1_VR1 99.9 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000021.1:686353-687393:+ gene-YJR154W_ZTW1 rna-NM_001181812.1_ZTW1 cds-NP_012688.1_ZTW1 99.6 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047496.1:721020-722060:+ gene-YJR154W_Sparadoxus rna-NM_001181812.1_Sparadoxus cds-NP_012688.1_Sparadoxus 89.7 100.0 Verified 1 1 1 False True False False False

Additional files