YJR149W (YJR149W)


Gene profile

Gene name: YJR149W
Reference locus (S288C): YJR149W
Gene biotype: protein_coding

Description: Putative nitronate monooxygenase; Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm

Top 10 interactors (score): BAT2 (0.759); HMS2 (0.747); RPS4A (0.718); FOX2 (0.704); ACP1 (0.65); TUM1 (0.641); CEM1 (0.635); PEX3 (0.618); PEX11 (0.604); ERG13 (0.588); FRS1 (0.579); CBF1 (0.559); COQ3 (0.558); LYS5 (0.552); IFA38 (0.521); CMR2 (0.447); PCS60 (0.447); ACC1 (0.445); HFA1 (0.445); GLN1 (0.432)

Homologues (species, bitscore): AT5G64250 (Arabidopsis thaliana, 60.1)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005304.1:678645-679859:+ gene-YJR149W_AKU4011 rna-NM_001181807.4_AKU4011 cds-NP_012683.4_AKU4011 99.0 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000187.1:14374-15588:- gene-YJR149W_BG1 rna-NM_001181807.4_BG1 cds-NP_012683.4_BG1 99.8 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:694493-695707:+ gene-YJR149W_Bruggeman rna-NM_001181807.4_Bruggeman cds-NP_012683.4_Bruggeman 99.4 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:699106-700320:+ gene-YJR149W_CAT1 rna-NM_001181807.4_CAT1 cds-NP_012683.4_CAT1 99.8 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005368.1:690692-691906:+ gene-YJR149W_CBS1585 rna-NM_001181807.4_CBS1585 cds-NP_012683.4_CBS1585 99.1 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005352.1:709577-710791:+ gene-YJR149W_CBS436 rna-NM_001181807.4_CBS436 cds-NP_012683.4_CBS436 99.8 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005336.1:677465-678679:+ gene-YJR149W_CBS6412 rna-NM_001181807.4_CBS6412 cds-NP_012683.4_CBS6412 99.1 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005320.1:680124-681338:+ gene-YJR149W_CBS6413 rna-NM_001181807.4_CBS6413 cds-NP_012683.4_CBS6413 99.1 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001531.1:689519-690733:+ gene-YJR149W_CENPK1137D rna-NM_001181807.4_CENPK1137D cds-NP_012683.4_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005480.1:683063-684277:+ gene-YJR149W_EthanolRed rna-NM_001181807.4_EthanolRed cds-NP_012683.4_EthanolRed 99.0 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:694679-695893:+ gene-YJR149W_FaliES1 rna-NM_001181807.4_FaliES1 cds-NP_012683.4_FaliES1 99.0 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000095.1:4434-5648:+ gene-YJR149W_JAY291 rna-NM_001181807.4_JAY291 cds-NP_012683.4_JAY291 99.8 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005416.1:693402-694616:+ gene-YJR149W_MUCL30387 rna-NM_001181807.4_MUCL30387 cds-NP_012683.4_MUCL30387 99.0 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:690889-692103:+ gene-YJR149W_MUCL30388 rna-NM_001181807.4_MUCL30388 cds-NP_012683.4_MUCL30388 99.4 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005288.1:684175-685389:+ gene-YJR149W_MUCL39482 rna-NM_001181807.4_MUCL39482 cds-NP_012683.4_MUCL39482 99.1 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005430.1:503995-505209:+ gene-YJR149W_MUCL42920 rna-NM_001181807.4_MUCL42920 cds-NP_012683.4_MUCL42920 99.0 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:707139-708353:+ gene-YJR149W_NCIM3186 rna-NM_001181807.4_NCIM3186 cds-NP_012683.4_NCIM3186 96.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005272.1:681944-683158:+ gene-YJR149W_NCYC1407 rna-NM_001181807.4_NCYC1407 cds-NP_012683.4_NCYC1407 99.1 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:699927-701141:+ gene-YJR149W_PE2H3 rna-NM_001181807.4_PE2H3 cds-NP_012683.4_PE2H3 99.8 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999881.1:693616-694830:+ gene-YJR149W_PE2H4 rna-NM_001181807.4_PE2H4 cds-NP_012683.4_PE2H4 99.8 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:707160-708374:+ gene-YJR149W_S288C rna-NM_001181807.4_S288C cds-NP_012683.4_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000108.1:20099-21313:- gene-YJR149W_SA1 rna-NM_001181807.4_SA1 cds-NP_012683.4_SA1 99.8 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005496.1:688706-689920:+ gene-YJR149W_ThermosaccDry rna-NM_001181807.4_ThermosaccDry cds-NP_012683.4_ThermosaccDry 99.0 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005464.1:690846-692060:+ gene-YJR149W_VR1 rna-NM_001181807.4_VR1 cds-NP_012683.4_VR1 99.9 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000021.1:667804-669018:+ gene-YJR149W_ZTW1 rna-NM_001181807.4_ZTW1 cds-NP_012683.4_ZTW1 99.0 100.0 Unannotated 1 1 0 False False False False True
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047496.1:702088-703306:+ gene-YJR149W_Sparadoxus rna-NM_001181807.4_Sparadoxus cds-NP_012683.4_Sparadoxus 84.9 100.0 Unannotated 1 1 0 False False True False False

Additional files