YJR120W (YJR120W)


Gene profile

Gene name: YJR120W
Reference locus (S288C): YJR120W
Gene biotype: protein_coding

Description: Putative uncharacterized protein YJR120W; Protein of unknown function; essential for growth under anaerobic conditions; mutation causes decreased expression of ATP2, impaired respiration, defective sterol uptake, and altered levels/localization of ABC transporters Aus1p and Pdr11p

Top 10 interactors (score): HFD1 (0.748); YNR040W (0.744); ATP2 (0.733); YPR010C-A (0.715); YGR126W (0.711); HEM25 (0.696); YOR062C (0.696); YHR210C (0.679); THO1 (0.671); ECM23 (0.671); AIM18 (0.668); RDL2 (0.619); FMP10 (0.616); PAU7 (0.612); YBL029C-A (0.574); BCH1 (0.574); YOR020W-A (0.572); CRP1 (0.572); COQ9 (0.571); MPM1 (0.565)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005304.1:618619-618969:+ gene-YJR120W_AKU4011 rna-NM_001181778.1_AKU4011 cds-NP_012654.1_AKU4011 99.4 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000076.1:54605-54955:- gene-YJR120W_BG1 rna-NM_001181778.1_BG1 cds-NP_012654.1_BG1 99.4 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:634330-634680:+ gene-YJR120W_Bruggeman rna-NM_001181778.1_Bruggeman cds-NP_012654.1_Bruggeman 99.7 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:638103-638453:+ gene-YJR120W_CAT1 rna-NM_001181778.1_CAT1 cds-NP_012654.1_CAT1 99.4 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005368.1:630661-631011:+ gene-YJR120W_CBS1585 rna-NM_001181778.1_CBS1585 cds-NP_012654.1_CBS1585 99.4 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005352.1:649538-649888:+ gene-YJR120W_CBS436 rna-NM_001181778.1_CBS436 cds-NP_012654.1_CBS436 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005336.1:617437-617787:+ gene-YJR120W_CBS6412 rna-NM_001181778.1_CBS6412 cds-NP_012654.1_CBS6412 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005320.1:620092-620442:+ gene-YJR120W_CBS6413 rna-NM_001181778.1_CBS6413 cds-NP_012654.1_CBS6413 99.4 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001531.1:629484-629834:+ gene-YJR120W_CENPK1137D rna-NM_001181778.1_CENPK1137D cds-NP_012654.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005480.1:623034-623384:+ gene-YJR120W_EthanolRed rna-NM_001181778.1_EthanolRed cds-NP_012654.1_EthanolRed 99.4 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:634497-634847:+ gene-YJR120W_FaliES1 rna-NM_001181778.1_FaliES1 cds-NP_012654.1_FaliES1 99.4 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000054.1:54276-54626:- gene-YJR120W_JAY291 rna-NM_001181778.1_JAY291 cds-NP_012654.1_JAY291 99.4 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005416.1:633123-633473:+ gene-YJR120W_MUCL30387 rna-NM_001181778.1_MUCL30387 cds-NP_012654.1_MUCL30387 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:630849-631199:+ gene-YJR120W_MUCL30388 rna-NM_001181778.1_MUCL30388 cds-NP_012654.1_MUCL30388 99.4 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005288.1:624144-624494:+ gene-YJR120W_MUCL39482 rna-NM_001181778.1_MUCL39482 cds-NP_012654.1_MUCL39482 99.4 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005432.1:628633-628983:+ gene-YJR120W_MUCL42920 rna-NM_001181778.1_MUCL42920 cds-NP_012654.1_MUCL42920 99.4 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:647105-647455:+ gene-YJR120W_NCIM3186 rna-NM_001181778.1_NCIM3186 cds-NP_012654.1_NCIM3186 99.1 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005272.1:621694-622044:+ gene-YJR120W_NCYC1407 rna-NM_001181778.1_NCYC1407 cds-NP_012654.1_NCYC1407 99.1 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:639892-640242:+ gene-YJR120W_PE2H3 rna-NM_001181778.1_PE2H3 cds-NP_012654.1_PE2H3 99.4 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999881.1:633581-633931:+ gene-YJR120W_PE2H4 rna-NM_001181778.1_PE2H4 cds-NP_012654.1_PE2H4 99.4 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:647126-647476:+ gene-YJR120W_S288C rna-NM_001181778.1_S288C cds-NP_012654.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000069.1:54651-55001:- gene-YJR120W_SA1 rna-NM_001181778.1_SA1 cds-NP_012654.1_SA1 99.4 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005496.1:628428-628778:+ gene-YJR120W_ThermosaccDry rna-NM_001181778.1_ThermosaccDry cds-NP_012654.1_ThermosaccDry 99.4 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005464.1:630815-631165:+ gene-YJR120W_VR1 rna-NM_001181778.1_VR1 cds-NP_012654.1_VR1 99.4 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000021.1:607780-608130:+ gene-YJR120W_ZTW1 rna-NM_001181778.1_ZTW1 cds-NP_012654.1_ZTW1 99.4 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047496.1:642023-642383:+ gene-YJR120W_Sparadoxus rna-NM_001181778.1_Sparadoxus cds-NP_012654.1_Sparadoxus 90.9 99.4 Unannotated 1 1 0 False False False True False

Additional files