YJR107C-A (YJR107C-A)

Gene profile

Gene name: YJR107C-A
Reference locus (S288C): YJR107C-A
Gene biotype: protein_coding

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005304.1:599961-600197:- gene-YJR107C-A_AKU4011 rna-NM_001395036.1_AKU4011 cds-NP_001381966.1_AKU4011 100.0 100.0 Mismatch 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000190.1:7397-7633:+ gene-YJR107C-A_BG1 rna-NM_001395036.1_BG1 cds-NP_001381966.1_BG1 100.0 100.0 Mismatch 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000140.1:89-325:- gene-YJR107C-A_Bruggeman rna-NM_001395036.1_Bruggeman cds-NP_001381966.1_Bruggeman 99.5 100.0 Mismatch 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:619169-619405:- gene-YJR107C-A_CAT1 rna-NM_001395036.1_CAT1 cds-NP_001381966.1_CAT1 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005368.1:612017-612253:- gene-YJR107C-A_CBS1585 rna-NM_001395036.1_CBS1585 cds-NP_001381966.1_CBS1585 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005352.1:630608-630844:- gene-YJR107C-A_CBS436 rna-NM_001395036.1_CBS436 cds-NP_001381966.1_CBS436 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005336.1:599164-599400:- gene-YJR107C-A_CBS6412 rna-NM_001395036.1_CBS6412 cds-NP_001381966.1_CBS6412 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005320.1:601425-601661:- gene-YJR107C-A_CBS6413 rna-NM_001395036.1_CBS6413 cds-NP_001381966.1_CBS6413 100.0 100.0 Mismatch 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001531.1:610775-611011:- gene-YJR107C-A_CENPK1137D rna-NM_001395036.1_CENPK1137D cds-NP_001381966.1_CENPK1137D 100.0 100.0 Mismatch 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005480.1:604379-604615:- gene-YJR107C-A_EthanolRed rna-NM_001395036.1_EthanolRed cds-NP_001381966.1_EthanolRed 100.0 100.0 Mismatch 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:615845-616081:- gene-YJR107C-A_FaliES1 rna-NM_001395036.1_FaliES1 cds-NP_001381966.1_FaliES1 100.0 100.0 Mismatch 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000054.1:73338-73574:+ gene-YJR107C-A_JAY291 rna-NM_001395036.1_JAY291 cds-NP_001381966.1_JAY291 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005416.1:614238-614474:- gene-YJR107C-A_MUCL30387 rna-NM_001395036.1_MUCL30387 cds-NP_001381966.1_MUCL30387 99.5 100.0 Mismatch 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:612208-612444:- gene-YJR107C-A_MUCL30388 rna-NM_001395036.1_MUCL30388 cds-NP_001381966.1_MUCL30388 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005288.1:605485-605721:- gene-YJR107C-A_MUCL39482 rna-NM_001395036.1_MUCL39482 cds-NP_001381966.1_MUCL39482 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005432.1:609738-609974:- gene-YJR107C-A_MUCL42920 rna-NM_001395036.1_MUCL42920 cds-NP_001381966.1_MUCL42920 100.0 100.0 Mismatch 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:628436-628672:- gene-YJR107C-A_NCIM3186 rna-NM_001395036.1_NCIM3186 cds-NP_001381966.1_NCIM3186 99.5 100.0 Mismatch 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005272.1:603043-603279:- gene-YJR107C-A_NCYC1407 rna-NM_001395036.1_NCYC1407 cds-NP_001381966.1_NCYC1407 100.0 100.0 Mismatch 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:620942-621178:- gene-YJR107C-A_PE2H3 rna-NM_001395036.1_PE2H3 cds-NP_001381966.1_PE2H3 99.5 100.0 Mismatch 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999881.1:614631-614867:- gene-YJR107C-A_PE2H4 rna-NM_001395036.1_PE2H4 cds-NP_001381966.1_PE2H4 99.5 100.0 Mismatch 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:628457-628693:- gene-YJR107C-A_S288C rna-NM_001395036.1_S288C cds-NP_001381966.1_S288C 100.0 100.0 Mismatch 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000038.1:87016-87252:- gene-YJR107C-A_SA1 rna-NM_001395036.1_SA1 cds-NP_001381966.1_SA1 99.5 100.0 Mismatch 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005496.1:609779-610015:- gene-YJR107C-A_ThermosaccDry rna-NM_001395036.1_ThermosaccDry cds-NP_001381966.1_ThermosaccDry 100.0 100.0 Mismatch 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005464.1:611886-612122:- gene-YJR107C-A_VR1 rna-NM_001395036.1_VR1 cds-NP_001381966.1_VR1 99.5 100.0 Mismatch 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000021.1:589144-589380:- gene-YJR107C-A_ZTW1 rna-NM_001395036.1_ZTW1 cds-NP_001381966.1_ZTW1 98.7 100.0 Mismatch 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047496.1:623057-623293:- gene-YJR107C-A_Sparadoxus rna-NM_001395036.1_Sparadoxus cds-NP_001381966.1_Sparadoxus 92.8 100.0 Verified 1 1 1 False True False False False

Additional files