YJR027W (YJR027W)

Gene profile

Gene name: YJR027W
Reference locus (S288C): YJR027W
Gene biotype: protein_coding

Description: Transposon Ty1-JR1 Gag-Pol polyprotein; Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes

Top 10 interactors (score): YER138W-A (0.988); YDR098C-B (0.988); YGR109W-A (0.891); YDR261W-B (0.864); L9001 (0.717); YEL076C (0.695); HAP1 (0.608); DFG10 (0.563); YHL049C (0.526); SRP21 (0.499); SRP101 (0.454); SRP68 (0.45); SRP72 (0.45); SRP102 (0.45)

Homologues (species, bitscore): CRK8 (Arabidopsis thaliana, 90.5)

External links:
Saccharomyces genome database (SGD)
STRING database
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:472760-478028:+ gene-YJR027W_S288C rna-NM_001181685.2_S288C cds-NP_012560.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False

Additional files