Gene name: YJR027W
Reference locus (S288C): YJR027W
Gene biotype: protein_coding
Description: Transposon Ty1-JR1 Gag-Pol polyprotein; Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes
Top 10 interactors (score): YER138W-A (0.988); YDR098C-B (0.988); YGR109W-A (0.891); YDR261W-B (0.864); L9001 (0.717); YEL076C (0.695); HAP1 (0.608); DFG10 (0.563); YHL049C (0.526); SRP21 (0.499); SRP101 (0.454); SRP68 (0.45); SRP72 (0.45); SRP102 (0.45)
Homologues (species, bitscore): CRK8 (Arabidopsis thaliana, 90.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:472760-478028:+ | gene-YJR027W_S288C | rna-NM_001181685.2_S288C | cds-NP_012560.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |