YJL225C (YJL225C)

Gene profile

Gene name: YJL225C
Reference locus (S288C): YJL225C
Gene biotype: protein_coding

Description: Y' element atp-dependent helicase yjl225c; Catalyzes DNA unwinding and is involved in telomerase- independent telomere maintenance

Top 10 interactors (score): YML133C (0.927); YRF1-6 (0.922); YRF1-5 (0.919); YLL067C (0.919); YRF1-4 (0.917); YIL177C (0.906); BI4 (0.904); YHL050C (0.9); YHR218W (0.896); YLL066C (0.888); YBL112C (0.883); YHL049C (0.873); YRF1-2 (0.873); YRF1-7 (0.873); YEL077C (0.873); YBL113C (0.873); YFL064C (0.873); YRF1-1 (0.873); YRF1-3 (0.873); YHR219W (0.872)

Homologues (species, bitscore): mia3 (Danio rerio, 66.2); CG15765 (Drosophila melanogaster, 77.8)

External links:
Saccharomyces genome database (SGD)
STRING database
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:1025834-1026673:+ gene-YJL225C_CAT1 rna-NM_001181657.1_CAT1 cds-NP_012311.1_CAT1 15.3 15.9 Mismatch 1 1 0 False False True False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:445-6109:- gene-YJL225C_NCIM3186 rna-NM_001181657.1_NCIM3186 cds-NP_012311.1_NCIM3186 99.9 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:466-6130:- gene-YJL225C_S288C rna-NM_001181657.1_S288C cds-NP_012311.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False

Additional files