YJL193W (YJL193W)


Gene profile

Gene name: YJL193W
Reference locus (S288C): YJL193W
Gene biotype: protein_coding

Description: Uncharacterized transporter YJL193W; Putative protein of unknown function; predicted to encode a triose phosphate transporter subfamily member based on phylogenetic analysis; similar to YOR307C/SLY41; deletion mutant has a respiratory growth defect

Top 10 interactors (score): YNL144C (0.698); AIM41 (0.696); YNR029C (0.674); ICY1 (0.671); VHC1 (0.66); THI73 (0.658); NST1 (0.657); QRI7 (0.654); NNR1 (0.654); YKL162C (0.653); YNL208W (0.615); LEU5 (0.572); MCH4 (0.565); YIG1 (0.55); NUP84 (0.529); POR2 (0.528); LAM4 (0.528); SPG5 (0.526); SIP5 (0.524); YMD8 (0.508)

Homologues (species, bitscore): SLC35E1 (Homo sapiens, 79.7); Slc35e1 (Mus musculus, 76.6); slc35e1 (Danio rerio, 68.9); slc35e1 (Xenopus tropicalis, 60.8); CG14621 (Drosophila melanogaster, 84.7); APE2 (Arabidopsis thaliana, 60.5)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005304.1:59765-60973:+ gene-YJL193W_AKU4011 rna-NM_001181626.1_AKU4011 cds-NP_012342.1_AKU4011 99.3 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000181.1:37046-38254:+ gene-YJL193W_BG1 rna-NM_001181626.1_BG1 cds-NP_012342.1_BG1 99.5 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:71584-72792:+ gene-YJL193W_Bruggeman rna-NM_001181626.1_Bruggeman cds-NP_012342.1_Bruggeman 99.0 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:74788-75996:+ gene-YJL193W_CAT1 rna-NM_001181626.1_CAT1 cds-NP_012342.1_CAT1 99.4 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005368.1:65400-66608:+ gene-YJL193W_CBS1585 rna-NM_001181626.1_CBS1585 cds-NP_012342.1_CBS1585 99.4 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005352.1:90148-91356:+ gene-YJL193W_CBS436 rna-NM_001181626.1_CBS436 cds-NP_012342.1_CBS436 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005336.1:61882-63090:+ gene-YJL193W_CBS6412 rna-NM_001181626.1_CBS6412 cds-NP_012342.1_CBS6412 99.3 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005320.1:62875-64083:+ gene-YJL193W_CBS6413 rna-NM_001181626.1_CBS6413 cds-NP_012342.1_CBS6413 99.4 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001531.1:53831-55039:+ gene-YJL193W_CENPK1137D rna-NM_001181626.1_CENPK1137D cds-NP_012342.1_CENPK1137D 99.7 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005480.1:64064-65272:+ gene-YJL193W_EthanolRed rna-NM_001181626.1_EthanolRed cds-NP_012342.1_EthanolRed 99.1 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:69344-70552:+ gene-YJL193W_FaliES1 rna-NM_001181626.1_FaliES1 cds-NP_012342.1_FaliES1 99.2 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000164.1:48199-49407:- gene-YJL193W_JAY291 rna-NM_001181626.1_JAY291 cds-NP_012342.1_JAY291 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005416.1:73312-74520:+ gene-YJL193W_MUCL30387 rna-NM_001181626.1_MUCL30387 cds-NP_012342.1_MUCL30387 99.2 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:69473-70681:+ gene-YJL193W_MUCL30388 rna-NM_001181626.1_MUCL30388 cds-NP_012342.1_MUCL30388 99.0 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005288.1:64142-65350:+ gene-YJL193W_MUCL39482 rna-NM_001181626.1_MUCL39482 cds-NP_012342.1_MUCL39482 99.4 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005432.1:68744-69952:+ gene-YJL193W_MUCL42920 rna-NM_001181626.1_MUCL42920 cds-NP_012342.1_MUCL42920 99.2 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:71345-72553:+ gene-YJL193W_NCIM3186 rna-NM_001181626.1_NCIM3186 cds-NP_012342.1_NCIM3186 99.1 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005272.1:62752-63960:+ gene-YJL193W_NCYC1407 rna-NM_001181626.1_NCYC1407 cds-NP_012342.1_NCYC1407 99.4 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:75446-76654:+ gene-YJL193W_PE2H3 rna-NM_001181626.1_PE2H3 cds-NP_012342.1_PE2H3 99.6 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999881.1:75085-76293:+ gene-YJL193W_PE2H4 rna-NM_001181626.1_PE2H4 cds-NP_012342.1_PE2H4 99.6 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:71366-72574:+ gene-YJL193W_S288C rna-NM_001181626.1_S288C cds-NP_012342.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000022.1:81308-82516:- gene-YJL193W_SA1 rna-NM_001181626.1_SA1 cds-NP_012342.1_SA1 99.5 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005496.1:62536-63744:+ gene-YJL193W_ThermosaccDry rna-NM_001181626.1_ThermosaccDry cds-NP_012342.1_ThermosaccDry 99.3 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005464.1:69406-70614:+ gene-YJL193W_VR1 rna-NM_001181626.1_VR1 cds-NP_012342.1_VR1 99.6 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000021.1:50120-51328:+ gene-YJL193W_ZTW1 rna-NM_001181626.1_ZTW1 cds-NP_012342.1_ZTW1 99.5 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047496.1:74441-75649:+ gene-YJL193W_Sparadoxus rna-NM_001181626.1_Sparadoxus cds-NP_012342.1_Sparadoxus 89.7 99.9 Verified 1 1 1 False True False False False

Additional files