YJL118W (YJL118W)


Gene profile

Gene name: YJL118W
Reference locus (S288C): YJL118W
Gene biotype: protein_coding

Description: Uncharacterized protein YJL118W; Protein of unknown function; may interact with ribosomes, based on co-purification experiments; YJL118W is a non-essential gene; deletion enhances the toxicity of heterologously expressed human alpha-synuclein

Top 10 interactors (score): MTC1 (0.861); CRP1 (0.712); BUD31 (0.7); SVP26 (0.694); GCD14 (0.691); ALB1 (0.597); DMA1 (0.572); CAK1 (0.572); RRP43 (0.567); CRH1 (0.565); EMG1 (0.564); LSM1 (0.525); KOG1 (0.45); YIP5 (0.403)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005304.1:179959-180618:+ gene-YJL118W_AKU4011 rna-NM_001181551.1_AKU4011 cds-NP_012417.1_AKU4011 100.0 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000190.1:433119-433778:- gene-YJL118W_BG1 rna-NM_001181551.1_BG1 cds-NP_012417.1_BG1 99.6 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:192007-192666:+ gene-YJL118W_Bruggeman rna-NM_001181551.1_Bruggeman cds-NP_012417.1_Bruggeman 99.5 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:195815-196474:+ gene-YJL118W_CAT1 rna-NM_001181551.1_CAT1 cds-NP_012417.1_CAT1 99.5 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005368.1:185592-186251:+ gene-YJL118W_CBS1585 rna-NM_001181551.1_CBS1585 cds-NP_012417.1_CBS1585 99.8 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005352.1:210332-210991:+ gene-YJL118W_CBS436 rna-NM_001181551.1_CBS436 cds-NP_012417.1_CBS436 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005336.1:181613-182272:+ gene-YJL118W_CBS6412 rna-NM_001181551.1_CBS6412 cds-NP_012417.1_CBS6412 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005320.1:183067-183726:+ gene-YJL118W_CBS6413 rna-NM_001181551.1_CBS6413 cds-NP_012417.1_CBS6413 100.0 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001531.1:174108-174767:+ gene-YJL118W_CENPK1137D rna-NM_001181551.1_CENPK1137D cds-NP_012417.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005480.1:183927-184586:+ gene-YJL118W_EthanolRed rna-NM_001181551.1_EthanolRed cds-NP_012417.1_EthanolRed 100.0 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:189579-190238:+ gene-YJL118W_FaliES1 rna-NM_001181551.1_FaliES1 cds-NP_012417.1_FaliES1 100.0 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000099.1:70752-71411:+ gene-YJL118W_JAY291 rna-NM_001181551.1_JAY291 cds-NP_012417.1_JAY291 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005416.1:194275-194934:+ gene-YJL118W_MUCL30387 rna-NM_001181551.1_MUCL30387 cds-NP_012417.1_MUCL30387 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:190353-191012:+ gene-YJL118W_MUCL30388 rna-NM_001181551.1_MUCL30388 cds-NP_012417.1_MUCL30388 99.6 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005288.1:184538-185197:+ gene-YJL118W_MUCL39482 rna-NM_001181551.1_MUCL39482 cds-NP_012417.1_MUCL39482 100.0 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005432.1:190341-191000:+ gene-YJL118W_MUCL42920 rna-NM_001181551.1_MUCL42920 cds-NP_012417.1_MUCL42920 99.5 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:191618-192277:+ gene-YJL118W_NCIM3186 rna-NM_001181551.1_NCIM3186 cds-NP_012417.1_NCIM3186 99.2 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005272.1:182945-183604:+ gene-YJL118W_NCYC1407 rna-NM_001181551.1_NCYC1407 cds-NP_012417.1_NCYC1407 100.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:195734-196393:+ gene-YJL118W_PE2H3 rna-NM_001181551.1_PE2H3 cds-NP_012417.1_PE2H3 99.5 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999881.1:195378-196037:+ gene-YJL118W_PE2H4 rna-NM_001181551.1_PE2H4 cds-NP_012417.1_PE2H4 99.5 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:191639-192298:+ gene-YJL118W_S288C rna-NM_001181551.1_S288C cds-NP_012417.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000085.1:6866-7525:- gene-YJL118W_SA1 rna-NM_001181551.1_SA1 cds-NP_012417.1_SA1 99.6 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005496.1:182770-183429:+ gene-YJL118W_ThermosaccDry rna-NM_001181551.1_ThermosaccDry cds-NP_012417.1_ThermosaccDry 100.0 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005464.1:189851-190510:+ gene-YJL118W_VR1 rna-NM_001181551.1_VR1 cds-NP_012417.1_VR1 99.6 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000021.1:170049-170708:+ gene-YJL118W_ZTW1 rna-NM_001181551.1_ZTW1 cds-NP_012417.1_ZTW1 100.0 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047496.1:195246-195905:+ gene-YJL118W_Sparadoxus rna-NM_001181551.1_Sparadoxus cds-NP_012417.1_Sparadoxus 93.9 100.0 Verified 1 1 1 False True False False False

Additional files