Gene name: YJL114W
Reference locus (S288C): YJL114W
Gene biotype: protein_coding
Description: Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag
Top 10 interactors (score): Unknown
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | MBVO01000039.1:237-916:+ | gene-YJL114W_AKU4011 | rna-NM_001181547.2_AKU4011 | cds-NP_012422.2_AKU4011 | 99.8 | 99.8 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | MBVY01000184.1:5042-5721:- | gene-YJL114W_Bruggeman | rna-NM_001181547.2_Bruggeman | cds-NP_012422.2_Bruggeman | 99.7 | 99.8 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | MBVQ01000071.1:238-917:+ | gene-YJL114W_CBS6412 | rna-NM_001181547.2_CBS6412 | cds-NP_012422.2_CBS6412 | 99.8 | 99.8 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | MBVP01000090.1:238-917:+ | gene-YJL114W_CBS6413 | rna-NM_001181547.2_CBS6413 | cds-NP_012422.2_CBS6413 | 99.8 | 99.8 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000087.1:17-695:+ | gene-YJL114W_JAY291 | rna-NM_001181547.2_JAY291 | cds-NP_012422.2_JAY291 | 99.4 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | MBVX01000070.1:239-918:+ | gene-YJL114W_MUCL30387 | rna-NM_001181547.2_MUCL30387 | cds-NP_012422.2_MUCL30387 | 99.8 | 99.8 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | MBVW01000079.1:5041-5720:- | gene-YJL114W_MUCL30388 | rna-NM_001181547.2_MUCL30388 | cds-NP_012422.2_MUCL30388 | 99.8 | 99.8 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | MBVN01000003.1:5121-5800:- | gene-YJL114W_MUCL39482 | rna-NM_001181547.2_MUCL39482 | cds-NP_012422.2_MUCL39482 | 99.8 | 99.8 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | MBVV01000285.1:238-917:+ | gene-YJL114W_MUCL42920 | rna-NM_001181547.2_MUCL42920 | cds-NP_012422.2_MUCL42920 | 99.8 | 99.8 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:197894-198574:+ | gene-YJL114W_NCIM3186 | rna-NM_001181547.2_NCIM3186 | cds-NP_012422.2_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | MBVM01000049.1:5041-5720:- | gene-YJL114W_NCYC1407 | rna-NM_001181547.2_NCYC1407 | cds-NP_012422.2_NCYC1407 | 99.8 | 99.8 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:435771-436450:+ | gene-YJL114W_PE2H3 | rna-NM_001181547.2_PE2H3 | cds-NP_012422.2_PE2H3 | 99.4 | 99.8 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:197915-198595:+ | gene-YJL114W_S288C | rna-NM_001181547.2_S288C | cds-NP_012422.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |