YJL068C (YJL068C)


Gene profile

Gene name: YJL068C
Reference locus (S288C): YJL068C
Gene biotype: protein_coding

Description: Esterase that can function as an S-formylglutathione hydrolase; non-essential intracellular esterase; may be involved in the detoxification of formaldehyde, which can be metabolized to S-formylglutathione; similar to human esterase D

Top 10 interactors (score): SFA1 (0.999); FDH1 (0.99); ADE12 (0.975); AAT2 (0.973); PRM15 (0.972); APE4 (0.969); PGM1 (0.87); APE1 (0.87); LIH1 (0.837); DAK1 (0.835); PGM2 (0.831); DAK2 (0.818); CTA1 (0.77); DAS2 (0.76); YJL070C (0.756); SEI1 (0.744); AAT1 (0.716); TSL1 (0.709); MPM1 (0.698); STE24 (0.695)

Homologues (species, bitscore): ESD (Homo sapiens, 200.3); Esd (Mus musculus, 202.2); esd (Danio rerio, 208.8); esd (Xenopus tropicalis, 211.5); CG4390 (Drosophila melanogaster, 187.6); Y48G10A.1 (Caenorhabditis elegans, 210.3); SFGH (Arabidopsis thaliana, 208.0)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005304.1:295880-296779:- gene-YJL068C_AKU4011 rna-NM_001181501.1_AKU4011 cds-NP_012467.1_AKU4011 98.1 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000190.1:317729-318628:+ gene-YJL068C_BG1 rna-NM_001181501.1_BG1 cds-NP_012467.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:308419-309318:- gene-YJL068C_Bruggeman rna-NM_001181501.1_Bruggeman cds-NP_012467.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:312519-313418:- gene-YJL068C_CAT1 rna-NM_001181501.1_CAT1 cds-NP_012467.1_CAT1 98.7 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005368.1:307541-308440:- gene-YJL068C_CBS1585 rna-NM_001181501.1_CBS1585 cds-NP_012467.1_CBS1585 98.5 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005352.1:325548-326447:- gene-YJL068C_CBS436 rna-NM_001181501.1_CBS436 cds-NP_012467.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005336.1:296638-297537:- gene-YJL068C_CBS6412 rna-NM_001181501.1_CBS6412 cds-NP_012467.1_CBS6412 98.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005320.1:297994-298893:- gene-YJL068C_CBS6413 rna-NM_001181501.1_CBS6413 cds-NP_012467.1_CBS6413 98.2 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001531.1:295486-296385:- gene-YJL068C_CENPK1137D rna-NM_001181501.1_CENPK1137D cds-NP_012467.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005480.1:299718-300617:- gene-YJL068C_EthanolRed rna-NM_001181501.1_EthanolRed cds-NP_012467.1_EthanolRed 98.5 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:311293-312192:- gene-YJL068C_FaliES1 rna-NM_001181501.1_FaliES1 cds-NP_012467.1_FaliES1 98.5 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000138.1:108880-109779:- gene-YJL068C_JAY291 rna-NM_001181501.1_JAY291 cds-NP_012467.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005416.1:309576-310475:- gene-YJL068C_MUCL30387 rna-NM_001181501.1_MUCL30387 cds-NP_012467.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:305612-306511:- gene-YJL068C_MUCL30388 rna-NM_001181501.1_MUCL30388 cds-NP_012467.1_MUCL30388 98.8 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005288.1:300290-301189:- gene-YJL068C_MUCL39482 rna-NM_001181501.1_MUCL39482 cds-NP_012467.1_MUCL39482 98.5 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005432.1:306940-307839:- gene-YJL068C_MUCL42920 rna-NM_001181501.1_MUCL42920 cds-NP_012467.1_MUCL42920 99.8 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:312995-313894:- gene-YJL068C_NCIM3186 rna-NM_001181501.1_NCIM3186 cds-NP_012467.1_NCIM3186 98.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005272.1:298986-299885:- gene-YJL068C_NCYC1407 rna-NM_001181501.1_NCYC1407 cds-NP_012467.1_NCYC1407 98.5 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:311340-312239:- gene-YJL068C_PE2H3 rna-NM_001181501.1_PE2H3 cds-NP_012467.1_PE2H3 99.8 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999881.1:310984-311883:- gene-YJL068C_PE2H4 rna-NM_001181501.1_PE2H4 cds-NP_012467.1_PE2H4 99.8 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:313016-313915:- gene-YJL068C_S288C rna-NM_001181501.1_S288C cds-NP_012467.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000003.1:108902-109801:- gene-YJL068C_SA1 rna-NM_001181501.1_SA1 cds-NP_012467.1_SA1 98.7 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005496.1:304706-305605:- gene-YJL068C_ThermosaccDry rna-NM_001181501.1_ThermosaccDry cds-NP_012467.1_ThermosaccDry 98.5 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005464.1:306886-307785:- gene-YJL068C_VR1 rna-NM_001181501.1_VR1 cds-NP_012467.1_VR1 99.8 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000021.1:286092-286991:- gene-YJL068C_ZTW1 rna-NM_001181501.1_ZTW1 cds-NP_012467.1_ZTW1 98.5 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047496.1:310125-311024:- gene-YJL068C_Sparadoxus rna-NM_001181501.1_Sparadoxus cds-NP_012467.1_Sparadoxus 88.3 100.0 Verified 1 1 1 False True False False False

Additional files