Gene name: YJL052C-A
Reference locus (S288C): YJL052C-A
Gene biotype: protein_coding
Description: Uncharacterized protein YJL052C-A; Putative protein of unknown function; identified based on comparison to related yeast species; mCherry fusion protein localizes to the vacuole
Top 10 interactors (score): YOR268C (0.896); SPE4 (0.717); YBR225W (0.634); DSC2 (0.615); YLR345W (0.555); PRM7 (0.45); YGL117W (0.45); MRPS9 (0.45); GPA1 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:320700-320819:- | gene-YJL052C-A_AKU4011 | rna-NM_001184476.1_AKU4011 | cds-NP_076895.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:292978-293097:+ | gene-YJL052C-A_BG1 | rna-NM_001184476.1_BG1 | cds-NP_076895.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:333281-333400:- | gene-YJL052C-A_Bruggeman | rna-NM_001184476.1_Bruggeman | cds-NP_076895.1_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:338515-338634:- | gene-YJL052C-A_CAT1 | rna-NM_001184476.1_CAT1 | cds-NP_076895.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:332353-332472:- | gene-YJL052C-A_CBS1585 | rna-NM_001184476.1_CBS1585 | cds-NP_076895.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:350408-350527:- | gene-YJL052C-A_CBS436 | rna-NM_001184476.1_CBS436 | cds-NP_076895.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:321458-321577:- | gene-YJL052C-A_CBS6412 | rna-NM_001184476.1_CBS6412 | cds-NP_076895.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:322805-322924:- | gene-YJL052C-A_CBS6413 | rna-NM_001184476.1_CBS6413 | cds-NP_076895.1_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:320352-320471:- | gene-YJL052C-A_CENPK1137D | rna-NM_001184476.1_CENPK1137D | cds-NP_076895.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:324536-324655:- | gene-YJL052C-A_EthanolRed | rna-NM_001184476.1_EthanolRed | cds-NP_076895.1_EthanolRed | 98.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:336111-336230:- | gene-YJL052C-A_FaliES1 | rna-NM_001184476.1_FaliES1 | cds-NP_076895.1_FaliES1 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000138.1:133747-133866:- | gene-YJL052C-A_JAY291 | rna-NM_001184476.1_JAY291 | cds-NP_076895.1_JAY291 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:334436-334555:- | gene-YJL052C-A_MUCL30387 | rna-NM_001184476.1_MUCL30387 | cds-NP_076895.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:330475-330594:- | gene-YJL052C-A_MUCL30388 | rna-NM_001184476.1_MUCL30388 | cds-NP_076895.1_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:325107-325226:- | gene-YJL052C-A_MUCL39482 | rna-NM_001184476.1_MUCL39482 | cds-NP_076895.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:331802-331921:- | gene-YJL052C-A_MUCL42920 | rna-NM_001184476.1_MUCL42920 | cds-NP_076895.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:337863-337982:- | gene-YJL052C-A_NCIM3186 | rna-NM_001184476.1_NCIM3186 | cds-NP_076895.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:323803-323922:- | gene-YJL052C-A_NCYC1407 | rna-NM_001184476.1_NCYC1407 | cds-NP_076895.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:336202-336321:- | gene-YJL052C-A_PE2H3 | rna-NM_001184476.1_PE2H3 | cds-NP_076895.1_PE2H3 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:335847-335966:- | gene-YJL052C-A_PE2H4 | rna-NM_001184476.1_PE2H4 | cds-NP_076895.1_PE2H4 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:337884-338003:- | gene-YJL052C-A_S288C | rna-NM_001184476.1_S288C | cds-NP_076895.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000003.1:133764-133883:- | gene-YJL052C-A_SA1 | rna-NM_001184476.1_SA1 | cds-NP_076895.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:329524-329643:- | gene-YJL052C-A_ThermosaccDry | rna-NM_001184476.1_ThermosaccDry | cds-NP_076895.1_ThermosaccDry | 98.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:332013-332132:- | gene-YJL052C-A_VR1 | rna-NM_001184476.1_VR1 | cds-NP_076895.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:310900-311019:- | gene-YJL052C-A_ZTW1 | rna-NM_001184476.1_ZTW1 | cds-NP_076895.1_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:334895-335014:- | gene-YJL052C-A_Sparadoxus | rna-NM_001184476.1_Sparadoxus | cds-NP_076895.1_Sparadoxus | 97.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |